Detail



ID : Ahg938953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938953|scaffold_503144.1
Sequence
TTGGATCGGA GTCGAGGAAC ATGGATTTCG ACGAGACCGT GCCACTGAGC CAGCGGTCGG AGTGGGCAGA CGTGGTCCCG TTGACTCAGG ACGATGGCCC GAATCCGGTG GTGCCGATCG CCTACAAGGA AGAGTTCCGC GAGACTATGG ATTACTTTCG TGCGATTTAC TTTTCCGACG AGCGATCTCC TCGCGCACTA CGACTCACGG AAGAAACGCT CCGCTTAAAC TCCGGCAACT ACACAGTGTG GCATTTCAGG CGCCTAGTAC TCGAGGCCCT TAATCACGAC TTGTTTGAAG AACTCGAGTT CATCGAACGC ATTGCTGAGG ATAACTCTAA GAACTACCAA CTGTGGCATC ATCGGCGATG GGTTGCAGAG AAATTGGGTC CTGATGTTGC AGGGAGAGAA CTTGAATTTA CCCGTAGAGT ACTTTCACTT GATGCCAAAC ATTATCATGC TTGGTCACAT AGGCAGTGGA CGCTACGGGC ATTAGGAGGA TGGGAAGATG AGCTCGATTA CTGTCACGAG CTCCTTGAAG CTGACGTCTT TAACAATTCC GCCTGGAATC AGAGGTATTA CGTCATTACT CGATCTCCTC TTTTGGGAGG CCTAGAAGCC ATGAGAGAAT CTGAAGTAAG CTACACAATC AAAGCAATTT TAACCAATCC TGCAAACGAG AGCTCATGGC GATACCTGAA AGCTCTTTAC AAAGACGACA AAGAATCCTG GATTAGTGAT TCAAGTGTTT CCTCAGTCTG TTTGAATGTT TTATCCCGCA CGGATTGCTT CCATGGATTC GCTCTGAGCA CCCTTTTGGA TCTTCTATGC GATGGACTGA GACCAACCAA CGAGCATAAA GACTCAGTGA GAGCTCTAGC TAATGAAGAA CCAGATACTA ACTTGGCTAT TTTGGTGTGT ACCATTCTTG GTCGTGTAGA TCCTATAAGA GCTAATTATT GGGCATGGAG AAAGAGCAAG ATTACTGTAG CAGCAATGTG ACGACTCAAA ATCACACTTG CA 
Length1022
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18272045.. 18273732
Download Sequence
A.thaliana
AGI-codeAT3G59380.1
Descriptionfarnesyltransferase A
TAIR curator summaryEncodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.
Alias[ATFTA][FTA][PFT/PGGT-IALPHA][PLP][FARNESYLTRANSFERASE A][farnesyltransferase A][PLURIPETALA]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg483031 RNI-like superfamily protein
6.63325 Ahg481666 SAND family protein
7.14143 Ahg493633 histidine kinase 2
9.38083 Ahg912012 proteasome beta subunit C1
11.4891 Ahg493091 Peptidase M20/M25/M40 family protein
11.6189 Ahg483034 Microsomal signal peptidase 25 kDa subunit (SPC25)
12 Ahg478314 RAB GTPase homolog E1E
12.3693 Ahg476259 Vps52 / Sac2 family
14.0712 Ahg313324 Mediator complex, subunit Med10
16.0935 Ahg337635 Nuclear pore complex protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression