| Annotation |
|---|
| Description | jgi|Araly1|350399|fgenesh1_pg.C_scaffold_6000992 |
| Sequence |
ATGGAGCAAA GTTCTGTTGT TGCAAAGATG CAATCAAACG AAGAGTTCGT CAAATTCTTA GGAAAAGGTG CTTACGGTTC GGTTGATCTC ATCAAATACA CTAAAACTGA TGGATCCTCG TTTCTGGCCG CCGTAAAAAC ATCTTACGCT GAGATACTCG AAGATTACAA CGCTCTCAAA AGAGAGATTC AGATTTTGTC TGAACTCAAA GGATATCCGA ACATCGTTAT ATGTTATGAA GACGATTTGG AAGAAGGTTT CAACGATCAC GGACATCAAG TTTACAAGTT GCTTCTCGAG TACGCAAACG AAGGGAGTCT ACGTTCTTTC ATGGAAAATT ATACGGACAA AAAGTTACCA GATCCGATGA TCAGAGACTT CACGCGTATG ATTCTCGAAG GATTGGTCTC AATTCATAGT CACGGTTATG TTCATTGCGA TCTCAAATCC GATAACCTTC TTATCTTCTC TCGGAAAGAT GCTTCTTCGT ACGAGTTGAA GATTTCTGAT TTCGGAAACT GTAGAGAAGT CGGAGAAGTT CCGGATCACT GGGAAATTGA TTTCCCGTTT GTGGGAACGC CTATTTACAT GCCGCCTGAG TCTCTCATCG ACGGTGCTGC CAAAAAAACC CTAGATTTGT GGTCGTTAGG GTGCTTAGTG TTGGAGATGT ATACAGGTGA GAAGCCATGG GCAGGGGTTG GAATTGTCGA TCTCGTGAAT TTTCTCAGTG ATGGTGAAGC TCCAGATATC CCTGAGTGTG TGCCTTGTGA TGCAAGAGAG TTTATTGAAA CGTGTTTCGC AAGGGAACAT GAGAAGAGAG GAAACGCGTC TGAGTTGATG TTGCATCCGT TTTTGTGTCC TGAAGAGAAG ACGGAGAAGA TTGTTGTAGC CGTCGTTAAA GAAAAGAAAA CCTTGCTGGT GAAGTTGAAG TTGAGAATCA AACGAGCTTC GAAGATAACA ATGGATATTC GAGAGAAGCC CTTGAAATTG AAGATGTTTC CATCTAAGCC TACACAGCTT AAGAAACTTT TGAGTAAACT CTTGAGGTTT TATTACGTAA AGATTTGGGT GTCTTTCAAT TTTGCCGAGT TCTCCGGCAG CTCAACGATG GTGACTCGCT TAAGACTCGT TTCGAGATCT TCTCGTTACG CCACCGTCAA GTTCACTGAG TCTTTCTCAG CATCATGCTC ATGTCGTCTC TTCTCAGCCT CCACCGACCC CGAATCCGAA TCTCAACCCG AACAAGCCCC GCCTACGAAT CCCGTCACCG GAGACGAAGA GCGACACGAA AAGCTAAGGA ATCTCCGAGT TCTTCTTCAG CAGAATCGAA TCGAAACGGC GCGTGGCGTT CTCTCTTCGC TGCTTCGATC GGATTCTACG CCGTTCACAT CGCCGAAAGA GCTCTTCTCT GCCTTCGCGC TATCATCTCC GTCGTTGAAA CACGATTTCT CCTACATGCT TCTCTCCGTG CTACTAAACG AATCGAAGAT GATTTCTGAA GCTGCGGATT TGTTCTTCGC TTTGAGGAAT GAAGGTATTT TTCCCAGCTC AGATTCGTTA ACGCTTTTGC TTGATCATCT TGTGAAGACA AAACAATTCA GAGTGACTAT AAACGTATTT TTGAATATTC TGGAATCGGA TTTTCGTCCG AGTAAGTTCA TGTATGGGAA AGCAATTCAA GCTGCTGTCA AATTGAGCGA TGTAGGTAAA GGTTTAGAGC TGTTTAATCG GATGAAGCAC GATAGAATCT CTCCCACTGT GTTTATATAC AATGTCCTTA TTGATGGGTT ATGTAAAGTG AGACAGATGA AAGATGCAGA ACAGTTGTTC GACGAAATGC TTGCAAGAAG ATTGCTACCT TCTTTGATAA CGTACAACAC GTTGATCGAC GGATATTGCA AAGCTGGGAA TCCGGAAAAG AGTTTTAAAG TGAGAGAACG TATGAAAGCG GATAATATCG AACCGAGTCT TATTACGTTT AATACTTTGC TTAAGGGACT GTTTAAAGCT GGAATGGTGG AAGATGCAGA GAATGTTTTG AAGGAAATGA AGGATCAGGG GTTTGTACCA GATGCTTTCA CCTTCAGTAT TCTGTTTGAT GGTTATTCGA GTAACGATAA AGCTGATGCT GCTTTGGGTG TTTATGAGAC TGCGGTTGAT TCTGGCGTGA AAATGAATGC TTATACTTGT AGCATATTGC TGAATGCGTT GTGCAAAGAG GGAAAGATAG AGAAGGCGGA AGAGATTTTG GGGAGAGAGA TGGCTAAGGG GCTTGTCCCG AACAAGGTTA TTTATAACAC AATGATTGAT GGATACTCTC GGAAAGGTGA TCTAGTTGGA GCTCGGATGA AAATCGATGC CATGGAGAAA CAAGGGATGA AGCCAGATCA TTTGGCGTTC AATTGTTTGA TTAGGACATT TTGTGAATTG GGGGATATGG ATAATGCTCA GCAAGAGGTT AACAAAATGA AACTGAAGGG AGTTTCTCCT AGCGTGGAGA CATATAACAT CCTGATTGGG GGCTATGGGA GAAAGTATGA ATTTGATAAG TGCTTCGACC TTCTTAAAGA AATGGAAGAC ATCGGGACGA TGCCGAATGT TGTTAGCTAT GGAACTCTGA TAAATTGTTT GTGCAAAGGT TCTAAACTTC TTGAAGCTCA GATTGTTAAG AGGGATATGG AAGACAGAGG GGTTTCACCG AATGTAAGGA TATATAACAT GCTTATCGAT GGTTGTTGCT CAAAGGGGAA GATAGAAGAC GCTTTCCGGT TCTCTGAGGA GATGTTCAAA AAGGGAATAG AATTAAATCT GGTGACTTAT AACACCCTCA TTGATGGGTT GTCCATGAAC GGGAAATTAG CAGAAGCTGA AGACATGCTT CTCGAAATCT CAAGAAAGGG TCTCAAACCA GATGTATTCA CGTATAACTC ACTAATATCT GGATACAGAT TTGCTGGAAA CGTGCAAAGA TGTATCGCGC TGTATGAAGA GATGAAGGGA TCAGGAATAA AACCCACTCT GAAGATATAT CATCTTTTGA TCAGTTTGTG CACCAAGGAG GGGATAGAGC TCACAGAGAA AATATTTGGA GAGATGTCGT TGAAACCAGA CTTATTAGTT TACAATGGGG TTCTCCATTG CTATGCCGTA CATGGAGATA TGGATAAGGC TTTTAATTTG CAGAAGCAGA TGATTGAAAA GAGTATTGGT TTGGATAAGA CAACCTATAA CAGCTTGATT CTGGGACAAC TGAAGCTAGG AAAACTGTGT GAGGTTAGGA GTTTGATTGA CGAGATGAAA GCCCGGGAAA TGGAACCTGA AGCTGATACA TATGACATAA TAGTGAAGGG GCATTGTGAG ATGAAGGATT ATATGGGAGC ATATGTTTGG TACAGAGAGA TGCAAGAGAA AGGTTTGCTA TTAGATGTTT GCATAGGCGA TGAGCTAGTG AGTGGGCTTA AAGAAGAATG GAGGTCAAAG GAGGCAGAGA ATGTCATTTC TGAAATGAAT GGTCGCAAGC TAGGTGATGT AATAGTGGAT GAGGATCTAT CTGCAACAGA GAGAAGCTTT GAAAATCAAG AATGTGTGCT TCAAGATAAA TACTTTTGA |
| Length | 3609 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4729961.. 4734020 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G12100.1 |
| Description | pentatricopeptide (PPR) repeat-containing protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg485145 | PLANT U-BOX 39 |
| 4.58258 |
Ahg898845 | thylakoid lumenal 17.9 kDa protein, chloroplast |
| 8.77496 |
Ahg922639 | RECQ helicase L2 |
| 9.79796 |
Ahg915639 | topoisomerase II |
| 11.3137 |
Ahg479515 | alpha/beta-Hydrolases superfamily protein |
| 14.4222 |
Ahg477950 | HCO3- transporter family |
| 14.8324 |
Ahg928298 | Rab escort protein |
| 14.9666 |
Ahg493112 | Polyketide cyclase / dehydrase and lipid transport protein |
| 16.2481 |
Ahg316165 | Proteinase inhibitor, propeptide |
| 18.303 |
Ahg483334 | vascular plant one zinc finger protein 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|