| Annotation |
|---|
| Description | jgi|Araly1|485145|fgenesh2_kg.5__1137__AT3G47820.1 |
| Sequence |
CTATGCCACA ACACAACAGC CCCGGCGAAA CCCCGACGGA GTTCCTCTGT CCCATCACCG GATTTTTGAT GTCAGACCCA GTCGTCGTCG CTTCAGGTCA AACATTTGAA CGTATCTCCG TCCAAGTTTG TCGGAATCTC GGATTTGCAC CGAAGCTTCA CGACGGAACT CAACCTGATT TATCCACTGT AATCCCAAAT CTCGCCATGA AATCAACAAT TCTCAGCTGG TGCGATAGAA ACAAAATGGA GCATCCTCGT CCTCCTGATT ACGCTTACGT TGAAGGTGTG GTTCGTACCC GAATGGATTC AAGTCCTCCG GGTACGGGTC ATCGGATCGC TAAATCGGAA ATCTTACCTC CGGTGGCTGA GAATTCAAAT TCGAATTCGG ATTCAGATTA TGAATCTGTA ATGGGAGCGA TTCGTTCTCG TTCAAGAACT TCAATATCGT CAAGCACTTC TCTTCCACTT CACCAAACCC GACCCGTTAA TCACTCGACC CGAATCCCTA ACTCATTCTC TACATCGGAT TATTCATCTT TTCCTCCGAT GTCACCGGAA GAAGAAGAGA TCTACAACAA ATTAAGCAGC GTAGACACAA TCGATCACGA GCAAGGTCTG ATTCAGCTAA GGAAGACGAC GAGATCAAAC GAGAGCACGA GAATCTCTCT TTGCACTGAT CGGATTCTCT CATTACTCCG ATCTCTGATC GTTTCACGGT ACAACATCGT GCAAACAAAC GCCGCCGCAT CGATTGTTAA TCTCTCGTTA GAGAAACCTA ACAAATTGAA AATCGTACGG TCAGGATTCG TTCCTTTGTT GATCGATGTT TTGAAATCGG GATCAACGGA GGCGCAAGAA CATGTAATCG GAGCTTTGTT TAGTTTAGCG GTTGAGGAAG AGAACAAGAT GGTGATCGGG GTTCTTGGTG CGGTGGAGCC GCTTCTTCAC GCGCTTCGAT CATCGGAGAG TGAGAGAGCG CGTCAAGACG CGGCGCTTGC GCTTTATCAT CTGTCGTTGA TTCCGAATAA CCGAATTAGG CTGGTTAAAG CCGGTGCGGT GCCGATGTTG CTGTCTATGA TCAGATCCGG TGAATCGGCG AGCCGGATTC TTTTGTTACT ATGTAATCTT GCGGCTTGTT CGGAAGGGAA AGGAGCGATG CTTGACGGGA ACGCGGTGTC GATACTGGTC GGGAAATTGC GAGAAGGTGG AGGAGGAGAG TCAGACGCGG CGGCGCGTGA GAATTGCGTT GGGGCTTTGT TGACGTTGAG TGTAGGGAAT ATGAGGTTTA GAGGATTGGC GAGTGAGGCG GGTGCGGAGG AGATTTTGAC GGAAATTGTG GAGAGCGAGA GCGGAAGCGG GCGGTTGAAG GAGAAAGCGG CAAAGATTCT GCAGGCATTG AGAGGCGGAG GGAATGATTT TGGAGAAGGT GCGGAGGCGC GTGAGTGGAA CCGTATGTTG GAAGCGAGTG GGCTAAGTCG TTCTCAGTTT CAACAAGGAG GGCAAAAAGG GGGTTTCGCT TATTCCTCTC AGTTTTAGCT CTAT |
| Length | 1544 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12824190.. 12825733 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G47820.1 |
| Description | PLANT U-BOX 39 |
| TAIR curator summary | |
| Alias | [PUB39][PLANT U-BOX 39] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg350399 | pentatricopeptide (PPR) repeat-containing protein |
| 9.53939 |
Ahg480500 | Regulator of Vps4 activity in the MVB pathway protein |
| 30.7409 |
Ahg343889 | Leucine-rich repeat protein kinase family protein |
| 34.4964 |
Ahg471863 | Protein kinase superfamily protein |
| 35.5528 |
Ahg470722 | exocyst subunit exo70 family protein B2 |
| 37.1483 |
Ahg921044 | senescence-associated E3 ubiquitin ligase 1 |
| 38 |
Ahg948591 | |
| 39.1918 |
Ahg477682 | Disease resistance protein (TIR-NBS class) |
| 44.8665 |
Ahg944827 | WRKY DNA-binding protein 11 |
| 47.3392 |
Ahg928898 | syntaxin of plants 121 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|