| Annotation |
|---|
| Description | jgi|Araly1|350409|fgenesh1_pg.C_scaffold_6001002 |
| Sequence |
ATGGGTTGTT CTTTTGATGG ATTTTTTTCA TATCCTCCTG GGCTCTCACT CAAGGAGCTT GGTATTATTA AGCTCACGGC TCAGTTTGTG GTGCGTTATG GTCCGGATTT TCTGTTGCCT TTCAAGAGGA CAGTGGATAA GAACCCTCTG TTTGACTTTT TGAAGCCTAC CGATACAAGG TTACTTTTTT ATGTGGGGCT TGTTAAAGCG TATGCTCAAG TATTGAGGAG TACTTTTGAT TGTGTGGAGA CCGTTCTTCA GAAGTTCTTA CACCATCTTC AATTGGAAAA GCTGGAGGAG GGAGTGGATG TTGCTTTGAT TGATTTGCTT GCTTTTACGT CTGGTGTTGA CTGTTTTACT TACATGGAGG ATGATTACTT TCCTATTTCC ATGCCACCAC CTGATCCCCT TTCCCTCATT TTAAAGAGCC GTGGTATGCT TGTGCGTACC GATTACCATG GAGCCCCAGC TGCTCATGAT TGTGTAGCTG CTGCTAAACC TTCTCTTGAG TTTTCTTTTC TGGGTCCGCC TCCAACACCA CTTCCCCCTG CATGGATCAC ACTCAAGGAG CTTGGTTATA TCAAACTCAC TGCCATGTTT TCCGCGCGGT ATGGGATGGA TTTGTTGAAG GATGTGGTTT CGTCAATGTT TGAGTTTATA AATCCAACTC ATAGCTGGTT CTATCTTTTC AATCTGCTTG TTGATGCGTA TTCCAGAGTA ATAAGAAGGC CATTGAGAGA GGAGCCAAAG ACTTGTAGCG ATTCCGTTGT TGAATGTTTC TCCGTCCATC TTCAAGTCGC CGATCTGTGG GACGGAGTGG AGAAGGGTAT GATTGATCTG CATGCCTTTG TGGGTGGTGT TGACTGTTTT GCCTACATGG AGAATGAAGA GTATTCTGAT AGGTTGCCAC CACCTGTACA CCTTTCAGTG TTGATGAATC AGCTCAAACA AATGCAGCCT CCACTGGGAT CTCAGCTTAC TGAATACCGT CCTCACAGTC AAGATGGACC TCAGGATATC CAGCCTGATG CTCCAGCTAC ACAACTTGAT CTTGTTCCTC TAAGGGATCC ACCTCTAGAA CCTCGCAATC GTGCTTTTAC ATTACCTGCG GGGATCACAC TCAAGGAGCT CGGTATTATT AAGTTCACAG CGCTGTTTGT GGCGCGGCTT GTTCACGCGT ATTCCAGAGT ACTAAGGCTT TCCAAAAAGA TGAGGAAGAT TGATTTTTGT CACGAGACCG TTCTTAACAC TTTTTTCCAC CGTCTTCAAC TGGAGAAGCT GGACAAGGGA GTGGAGATGG CTATGATTGA TTTGCATGCT TTTGTGGATG GTGTTGACTG TTTTGCTCGC ATGGAGGATG AAGAGTATGC TGCTAACCTG CCACCTCCTG AACACCTTTC AATGTGGATG AAGCAACTAA AACACCTGCA GCCTCCACTG GGATCTCAGC CTCTAAGACC TCACGATACT GCATCTACAA ATACTGCATT GATCTCACTC AAGGAGATTG GTATTTGTAT GCTCGCTGCG CAGTTTGTAG CGCGGTATGG GATGGATTTG ATGGAGATAG TTGTTGCAAA CCCTCAGTTT GAGTTTATGG AGCCAACTAA CTCAAGTTTC TATAGCTTCA ATAAACTTGT TGATGCTTAT TCCGGGATTT TAAAGCCTTC CAGAAAGCTG AAAAAGAGTG ATGCTTTTGG GGCGACCGTT GTTGAATGTT TTTTCAACCG TCTTCAATTA GACAAGCTGG AAGAGGGAGT GGAGATGGCT GTGATTGATT TGCATGCTTT TGTGGGTGGT GTTGACTATT TTACTGTCAC ATGTGGTGGT GAGAATCCTG CCGCCATGCC AGCACAGAAA AGCCTTTCAA AGTTGATGAC ACGGATGCGG CCTGGTATGC TTGTGGATCC TCCACTGGGA TCTCAGCTTA CTGAATACCG TGCTCAGAAA CAAGATGGAG CTACTGACGA GTGTTACCGT CATGAGCCTC CTCCTTCAAT GGATCCGCCT CTAAGCTCTC TTTGCCGTCT TTCATATACA TTACCTGATG GGATCATCAC ACTCAAGGAG ATTGGTATTT TGAAGCTAAC GGCGCAGTTT GTGGTGAGGT ATGGGATGGA TTTGATGAGG AGAGTGGTTA GTTTCCCTCA GTTTGTGTTT ATGGAGCCAA CTAATAGCTG GTTCCCTTTC TTCAATAAGC TTGTTGATGC GTATTCCAGA GTATTAAAGC CTTCCGGAAA GCAGGGGAAG AGTAAGTTTG ATAAGCATGC TGGAGGATTT ATTGATTGTT TTCTCCACCG TCTGCAATTG GACGAGCTGG AGGAGGGAGT GGAGATGGCT ATGGTTGATT TGCATGCTTT CGTGAGTGGT GTTGACTATT TTATTTTCAT GGAGGATGAT TATAATGAAA CGGAGGATGA AGAGTGTTCT GATCACTCCA CACCACCTGA ACACTTTTCA ATGTTGATGA ACCGTATAAC CCAAATGCAG CCTGGTATGC TTGTGGGATC TCAGCGTACT GAAGACTGTG GAGCTCAGAG TATCCACCCC GATGCTCCAG CTTCTCATGA GTGTGTAGGT GATGCCCAAC CTGATCTTGA GCGTACTCCT CCAAGACCCC TTCACAGTCT TGCGTTGGCA TTTCCTGCAT ATCTCGCAGT CAAGGGGTTT ATGACAGTCA AGGAGCTTGG TACTATGAAG CTCACAGCTC AGTTTGTGGC GAGGTATGGC ATGGATTCGA TGAAAGAAGT GGCCGCGTAT CCTCGGTTTG AGTTTATGGT GCCAACTCAT AGCTTTTTCC GTTTGTTCAA TGAGCTTGTT GATGCGTATT CCAAAGTATT AGAGCCTTCT AAAAAGCTGT GGAAGAAGGA GACGTCCGTT GTTGACCTTT TTTTCTACCG TCTTCAGTTC GTCGAGCTGG AGGATGGAGT GGAGATGGCT ATGATTGATT TGCATGCTTC TGTGTCCGGT GTTGACTGTT TTACTCACAT GGAGGAGTAC ATGGACGATG AAAAAAAGTA CTGTGATGGC GTGCCACAAC CTGAACACCT TTCAGTGTTA ATCAACCTAC TAAAAAAGCA GCCTGGTATA CTTGTGCGGC CTCCAGCTGG TCTACTGGGA TCTCAGAAAA TCCAACCTGA TGTGCAACGT GAGGAACCAA GGCGAGAGAG ACAAAAGCAT TTGAGAGAAA ATCATCCGAG GCGAAAGAGA CGGAAGCGTG ACTGTGATGT GCAACATGAG GAAACAAGAC TTCATGCACC AAAAGCAGGA AGAAGCAATA GGGAGCTTGT TATGAAACAA AAAAATTCAT CACAAATAAT AATCCGAAGT ACAAAACTCA GAAGCTTGAT TATTGGAAAC AGTCATGTTT TAAACTCAGA AGCTTCGCAT GTCTCCTCTT TTTCTTCTAA TACACACAGG ATTTGA |
| Length | 3426 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4762770.. 4766364 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06520.1 |
| Description | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.8564 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 19.1833 |
Ahg323966 | |
| 21.7715 |
Ahg316947 | Pectin lyase-like superfamily protein |
| 29.8496 |
Ahg485653 | purple acid phosphatase 21 |
| 31.305 |
Ahg481664 | transposable element gene |
| 32 |
Ahg921700 | ENTH/VHS/GAT family protein |
| 32.6803 |
Ahg477013 | Terpenoid cyclases family protein |
| 34.4674 |
Ahg950935 | Protein of unknown function (DUF1216) |
| 34.641 |
Ahg334832 | HCO3- transporter family |
| 35.1994 |
Ahg950383 | Auxin efflux carrier family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|