Detail



ID : Ahg354010

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354010|fgenesh1_pg.C_scaffold_7001183
Sequence
ATGGAACCTA CCACGAATCC AACTCCAACT CCAAGCTCCG CCGGCAACAG TGTCTGTACC GATGAATTGA CCAACCTGCC CCCGGAATCG CCACTAGGCA GCCAGGAGGA CGATGGCGTT GACTTCAGCC ACGAACAAGG ATCGGAGTCA AATGAAGCTA TTGACACTGA GAATGGTTCA AGATCCATAG ACAAGAACCA ATGCTCTGAA ACTGAAGATG TAGTTAGAGC AAAAGATTTA CAGACAGAAC CTGATTCACT GGATGATGAT GTGGAGATTG TAATCAAGAA CCAACATAAG TATTACTTTT ACTGCCCTTG CTGTGGTGAA GATATCACCA AAACAGTCAA GCTCGTAAAG ATGTCAGATC CCCAACCCAC AAAAGACCAT GACACTGAGA ATAGAGCTAA TGACAGTGAC ATTGAGAATG GTTCAAGATC CATAGGCAAA AAAACAAAGG TTCCATCATG GTTTCTTGAT TTTTGTCAGC CGCTGGTTTC TTCTGTTTAT GGTCCTAACA AAGACCAAGG CGAGAAAGGG GTTGATTCAA AGTTACCAGA AACTTCCGAT GACCTTGATA TCAATGGTGA AGAACCAAGC ATTGATGTCA GTAATGAGAA AGGCGGACCG AGTTTTCCAA AGTGGTACCT CGATGTTTTT GCTTGGTTGT TCCTCTGTAT TATTATTGCT CTCTCTGTCC TTTCGACTTC TCCACCGCCT TTCATTCAAC CGCATCTGCA ATTGCCTTCT ATGCCTTCAT TGCGGCTGCC TTCCGCTTCT ATACTTTTGT TACTTCCCAC GTTTGCGGTG TTGCTTCTCT TCATTATTTC AATGAGGTCC CGTTTCAGTC CAAGATATCA CGAGGAGAAA GGCGAAAATA GGGTCGATTC CAAGTCTACT AATACCACTA GTGAAGAACC AGCAAAAACT CAAAATAACG ATGACCAAGA TGCAAATCCT GATCAAGATT TTGACAAGAA AACAGACAAC CAAAACAATC ACCTAACTCC GATATATCCA TCAACACTGG AGCAACCTTC CAAGAAAATT ATCAATAAGG AAACTCAAGC AGAACCTGTA TTGCCACCTA ATGCTCAACC AGAGATCCCA AATAGTGTTG AACCACGCAA AGACGGTAAT AAACTCGAAA TCCTGAAAAG TATTGTGTAT GGAGGTCTTA CAGAATCCAT CACAAGCCTT TGCACCGTAA CATCTGCGGC GGCGACTGGT GCTTCAACTC TGAACGTTTT AGCCTTGGGA GTTGCCAATT TGTCAAGCGG TCTTCTTCTG ACCGTTCACA GTCTCCAAGA ACTAATAAAC GAGAAACCCA GAAGACAAAC AAACACTGAT GATTCTCCAG GAGAAGTAGA AGGAGAAGAA GATCGATACG AGGAAGTTCT CGGAAGAAGA GAGTATTCGA GGCTTCACAG ATTGATCGCA ATCTCTTCTT TCGTCGTCTT CGGCTTGATC CCACCTTTGG TATACGGCTT CTCGTTTCGA AGAAGATTGG AGAAGAGACA AGAGTACAAG GTTTTAGCAG TTTACGCAGT GTCTCTACTC TGCGTCGTCT TGCTCTCAAT TGCGAAAGCT TACGTCTCGA AGAAACGGGA TTATGTCAAG ACTCTGTTTC GGTACACGAC GATGGCGACG ACGGCATCGG GATTCTCTCA ATTTGTGGGA TACTTGGTCA GTCAGTGGCT TGAGAAAAGC GGGCTTTATG ATGATTCTTC AGAAACTCAA CGAGTTTGA 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5618580.. 5620131
Download Sequence
A.thaliana
AGI-codeAT4G27860.1
Descriptionvacuolar iron transporter (VIT) family protein
TAIR curator summary
Alias[MEB1][MEMBRANE OF ER BODY 1]
Gene coexpression
MR
MR Locus Description
7.48331 Ahg489781 Arginase/deacetylase superfamily protein
7.87401 Ahg472193 chlorophyllase 1
8.7178 Ahg926733
10.247 Ahg489287 Vacuolar iron transporter (VIT) family protein
10.6771 Ahg317230 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
12 Ahg471294 Pyridoxal-5'-phosphate-dependent enzyme family protein
12.9615 Ahg479107 Mannose-binding lectin superfamily protein
13.1149 Ahg482953 jacalin-related lectin 23
13.8564 Ahg472278 OPC-8:0 CoA ligase1
15.4919 Ahg325159 cytochrome p450 79a2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression