Detail



ID : Ahg354233

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354233|fgenesh1_pg.C_scaffold_7001406
Sequence
ATGCAGAGGA GCAGTGCCAT CAATAATAAT ATGCGTATCC CAACATCACC TGTGTCTTTC TCCCCGAGTA GCATTAACAT ACCTGGTTCA TTGGTTCTTG ATGGCTCTGC TTCAATGCAA CACTTACCTC AGCAGCAGCA GCAGCAGCCT GTTCCAATGA GGGAAAACAA TTATTCCCAT GTGGATAAGA AACCCAGATT AGAAGTGAAG CACGAAGACT TGTTGCAGCA GCAGATTTTA CAGCAGTTGA TCCACCGTCA GGACCCCACG GGAAGGAATC CGCAGTTGCA AGCTTTGCTT CAGCAGCAGA GACTCAGGCA ACACCAGCAG ATGCTTCAAT CCATGTCACC CTCCCAGAGG CTCCAACTTC AGCACCAGCA GCAGTTGAGA CAGCAATTAC AGCAACAACA GATTTCTCCT AATGTAGTTG GCGTCTGTGC TCGCAAATTG ATGATGTACT TGTATCATCT GCAGCAACGG CCTGCTGAAA ATTGCATTAC CTATTGGAGG AAATTTGTGG CAGAATACTT CTCACCTCGT GCAAAGCAAA GGTTGTGCTT GTCACAGTAC GAAAGTGCTG GGCACCATGC GCTTGGCATG TTTCGACAGG CAGCTCCGGA TATGTGGCAG TGTGATCTTT GCGGCACCAA GTCTGGAAAA GGATTTGAAG CAACTTTCGA TGTGCTTGCC AGACTTATTG AAATCAAATT TGCAAGTGGC ATCATTGATG AGCTCTTATA TCTGGACCAC CCACGAGAAA ACAGATTTCC CAATGGACTG ATGATGTTAG AATATAGAAA AGCAGTTCAG GAAACTGTAC ACGAGCAGTT TCGTGTTGTC CGTGAGGGCC ATCTTCGCAT CATATTCTCT CAAGATCTGA AGATACTGTC TTGGGAGTTT TGTGCTCGGC GTCATGAAGA GCTTCTTCTT CGCAGACTTA TTGCTCCTCA GGTGAACCAG TTGCTTCAGG TTGCACAGAA ATGCCAGAGC ACAATTTCAG AGAGTGGTTC AGAGGGAGTT TCTCAGCAGG ATTTGCAGTC AAACAGTAAT ATGGTCTTGG GAGCAGGACG ACAGCTGGCG AAGTTCATGG AATTACAGTC ACTGAATGAT CTTGGCTATC CAAAAAGATA TATCAGAACT CTACAGATAT CTGAAGTTGT CAAGAGCATG AAGGATCTGA TGAATTTCAC TGGCGAGCAC AAAATCGGCC CTATCGAGGG TTTAAAACAG CTTCTGGAAC AGACAGCGAC AGTGAAGCTC CAGAGACAGA AAATGCAAGA GATGGAGCAG TTTGGGCCAG CTCAAGCTCA AATGGCGTTA TCTTCAGGTA CGATGAGCGG TTCAACTGCC AACAACAACT CCAATAATCA CCATCAAATT GTTGGTCGTG GAGCTATGAA TGGCTCAGCT CAAGCCGCAG CAGCTTTGAC CAACTACCAA AGCATGCTTA TGAGGCAAAA TGCTATGAAT AACCCAAACT CAAATACGGG TAAACAAGAG GGGTTCTCGA GTCAGAATCC AACCCCGAAC TCAAACCAGA GTCCATCTTC TTCGTCAGAT CAGAGGCAGA ACTTAGCTAC AGGTGGATTT CCCAGTTCTC CTCAAATGCA ACAGCAGCGG CGCACCATGG ATGGCGCTCC CAGCATGCTT CCGCAGAATC ATCCTCGTCA GTTGCAATCA GCACAGTCAC ATGGTAACAC TCGGGAGCAG CAGATGCTTC ATCAGCTGTT GCAGGAGATG TCTGAAAATG GAGCGAGTGT GCAACAGCAA CAAGCCTTTT TGGGTCAAAG TGGTAGCAAC AGTAACGCAG AGAGAAACAC AACTGCCTCT ACTTCCAACA TCTCAGGAGG AGGCCGAGTT CCAAGCCGCA ACAATAGTTT TAAAGCAGCC TCAAACAACA ACCTTCCTTT TTCAGAAGAT ATATCGGTTT CGGACCATGA TTTCTCAGAA GATGGCTTCT TCAACATCAG TGATATCTAT GGTGGCTTGT AA 
Length1992
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6604639.. 6607818
Download Sequence
A.thaliana
AGI-codeAT4G25515.1
DescriptionSEUSS-like 3
TAIR curator summary
Alias[SLK3][SEUSS-like 3]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg483334 vascular plant one zinc finger protein 2
25.0998 Ahg948218
30.8545 Ahg494355 RNA-binding KH domain-containing protein
38.6523 Ahg487067 ubiquitin-protein ligase 4
43.359 Ahg912447 Family of unknown function (DUF572)
48.4974 Ahg478986 Regulator of chromosome condensation (RCC1) family protein
58.3438 Ahg487251 ADR1-like 2
61.6766 Ahg477585 DegP protease 7
62.482 Ahg900682 Ubiquitin fusion degradation UFD1 family protein
62.57 Ahg482660 don-glucosyltransferase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression