Detail



ID : Ahg478986

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478986|fgenesh2_kg.3__1687__AT3G15430.2
Sequence
TCAAGAGACG ACGACTAAGC AAGCCTCAAA AGGCAAACAG AGAGGAAGAA TCGCCACGAA AGAAGCTTAA GAAGCAAGAT ATTGAATTTT CCCTTCATTT TTCTATTCGT TCTCACACGT CTTTCACCAT TTTCTATTAT AAAAAAGCTC TTTTTAGACT TTTTGGTTTC ATTTGTTTAG TGGGCACCCA AAAAGTCAAG ACCTTTTGCT TTCCAGTTCG AAGAATCTGG CGTGTTCAGG TGGATTGATT CTTGCGATCT GACCCTTCTC ATGATTAGTT TTCGATCTTC GAATAGACCA ACTGCGAGAT TCTCATCTAT AACTCCGTTT TCCTATTCAA TTTCTTATCT CTTTCTACCA TCCAACGTCT TCTTCATACG CTACTTCAAT TGCTCTAGAT TTCGCCTCAA AATCTGACCC TCTTGTAGCT TGAAGCCACC CAAAGTCTCG TCTTTTACGT GTTCGATTAG GTCATTTTGA AACTCTGTTC TTAGAATTAG GAAGGAATAA AATGGCTGAC CGAAACTGGT TGATTTCGTT CGAGGATCTT CCTTCTCATT TGATCTTGGA GGTGTTGACC TCTGGGAAGC TTAGTGCGGT TGATCTACTT AGCTTGGAAT TGACCTCTAA GGTTTTCGGA GGGAGCCATG GATTCTACCC TTTGAAATTC AGATCACTCG CTGATTACGC GGCCTCTCAG CTTTGCTCTA TGCATCCTGT CTACGTGGGA ATGGGTTTGA CTACACAGAA AGAGCTCTTT GCCAATTGTG AGGGAAACTG GAAGCGGCTT TTGAGTTTCC TACAGTCAGT TGAGCAATCC TCAGATATGG TTGAAACCTC TCAAGGCAAA ATGCAAATTG CAACAGGAAA GTATCACACT TTGCTAATCA ATAACTCAAA GGTTTATTCT TGTGGTGTAA GTTTGTCCGG TGTTCTTGCT CATGGCCCTG AAACTACTCA ATGCGTAGCA TTTACGCCTA TAGAGTTTCC GTTCCCTGCA CAAGTTGCTC AAGTCTCAGC CACACAGAAC CATTCTGCTT TCGTATTGCA ATCTGGAGAG GTTCTCACTT GTGGGGATAA TTCATCGCAT TGCTGTGGTC ATTTAGATAC TAGCCGTCCA ATATTTAGGC CTAAGCTTGT TGAGGCTTTG AAGAGGACTC CTTGTAAGCA GGTGGCTGCT GGGCTTCACT TCACTGTGTT TCTATCAAGG GAAGGGCATG CGTATACTTG TGGATCAAAT ACACATGGGC AGCTTGGTCA TGGCGATACC ATGGACAGAC CAGTACCCAA AGTTGTTGAG TTTCTTAAAA ACATTGGCCC TGTGGTGCAA ATCGCAGCTG GACCCAGCTA TGTTTTAGCT GTAACACAGG ATGGCTCGGT TTACTCGTTT GGCTCTGGTT CTAACTTCTG TCTTGGTCAT GGAGAGCAAC AGGACGAGCT TCAGCCGCGT GTTATTCAGG CTTTTAAAAG AAAAGGTATT CATATACTCC GTGTCTCTGC AGGTGATGAA CACGCCGTGG CACTTGATTC CAATGGCCGT GTCTACACAT GGGGTAAAGG TTACTGCGGT GCTCTAGGCC ATGGAGACGA AAATGACAAG ATCACTCCTC AAGTTTTGGT CAATCTCAAG AATTGCCTTG CTGTCCAGGT GTGTGCAAGG AAAAGGAAGA CTTTTGTTTT GGTGGAAGGT GGGTTATTGT ATGGATTTGG GTGGATGGGG TTTGGAAGCC TTGGGTTCCC AGACAGAGGA GTTTCAGACA AAGTTCTGAG GCCAAGAGTA TTGGAGTGTC TGAAACCACA CCGTGTCTCT CAAGTTAGCA CCGGCTTGTA TCACACCATT GTGGTCACTC AACGTGGTCG CATTTTTGGG TTTGGAGATA ATGAAAGAGC TCAGCTTGGT CATGACTCAC TCCGCGGCTG CTTAGAACCA ACCGAAATCT TTCTCCATTG TGGCCGTTCT CGTAGCCGGC TTTGTTGATC CAAGGTATAG ATAAACAACC CTGTTTGTAT GAACCGGATT GGGATTGGAT TTACCGGTTA GTGTATGTTG TATTGATTTG TATCTGTTTG ATTTTTCAAG TTGTGTGAGT AATAGAAGAT ATTTCCGCAG AGAATCATGA CATGAGTTAG TTAATCTAAG AAGTTTT 
Length2147
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6126034.. 6129069
Download Sequence
A.thaliana
AGI-codeAT3G15430.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg479664 DNA binding
3.31662 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
5.74456 Ahg928727 subunit of exocyst complex 8
6.48074 Ahg481753 AAA-type ATPase family protein
6.78233 Ahg470941 Presenilin-1
7.93725 Ahg930813
11.6189 Ahg487697 transducin family protein / WD-40 repeat family protein
12.8062 Ahg471074 Cysteine proteinases superfamily protein
13.0767 Ahg482914 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
14.2829 Ahg472958
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression