Detail


ID : Ahg355413

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355413|fgenesh1_pg.C_scaffold_7002586
Sequence
ATGGACTCAA AAGCTGGGAA ACAAAAGAAG AGAAGTGTTG ACTCGGATGA TGTCTCTAGT GAAAGGAGAC CAAAGCGAGC AGCAGCATGC ACAAACTTCA AGGAGAAACC TCTCCGTATC TCTGAGAAAT CTGCAACTGT TGAAGCCAAG AAAGAGCAGA TCGTGGTGGA GGAGATCGTG GCGATAAAGT TAACTTCTTC TTTGGAGAGC AATGATGATC AACCTCGTCC AAACCGGAGG CTAACTGATT TCGTTTTACA TGATTCAGAC GGAGTTCTAC AGCCTGTGGA GATGTTGGAA CTTGGTGACA TTTTTATCGA AGGTGTTGTC TTACCTTTAG GTGATGACAA AAAGGAAGAA AACGGTGTGA GGTTTCAATC TTTTGGTCGA GTAGAGAACT GGAATATATC TGGTTATGAA GATGGTTCCC CGGTGATATG GATCTCAACC GCGTTAGCCG ATTACGATTG TCGTAAACCG GCAAGTAGCT ACAAGAAGAT GTACGATTAT TTCTTTGAGA AAGCTTGTGC TTGTGTGGCG GTATATACCA ACTTGTCCAA GAATCCTGAT ACAAGTCTTG ATGAGCTTCT TGCGGCGGTT GTTAGGTCGA TGATCGGAAA CAAGTTCTTT TCTAGCGGTG CAGCCATCCA AGAGTTTGTT ATATCCCAAG GAGAATTCAT ATATAACCAA CTCGCTGGTT TGGATGAGAC AGCCAATAAT CATGAAACAA GCTTTGTTGA GAATCCTGTT CTTGTGTCTC TAAGAGATCG TGGTAGTAGT AAACTTCACA AGGCTTTGTC TAATGTGGCT TTGGAGATTG ATGAGAGCAA GGCCGTGACA TCTGATCAAC TAATGGATGG TGCTGAGGAC GAGGACGTAA AATATGCTAA GCTAATCCAA GAAGAAGAGT ACCGGATATC TATGGAGCGG GAGAGAAATA AGAGAAGCTC AACAACTTCT GCTTCAAAGA AGTTTTACAT TAAGATCAAT GAAGATGAGA TTGCCCATGA TTATCCTCTC CCATATTACT ACAAGAACAC CAAAGAAGAA ACAGATGAGC TTCTACTCTT TGAAGCTGGC TATGAGGTTG ATACGAGGGA CCTACCTTAC AAAACTCTTC ACAATTGGGC ACTGTACAAC TCTGATTCAC GTTTCATATC TCTCGAGCTT CTCCCGATGA AGCAATGTGA TGATATCGAT GTCACCGTCT TTGGGTCAGG TGTGGTGGCT GAAGATGATG GAAGCGGGTT TTGTCTCGAT GATACTGAGA GTTCTACGCA GTCAAATGAT CCTGATGGGA TGAACATATT CCTTAGTCAA ATAAAGGAAT GGGTGATTGA GTTTGGGGCA GAAATGGTCT TTGTTACATT ACGAACAGAT ATGGCCTGGT ATCGACTTGG GAAACCGTCA AAGCAATATG CTCCTTGGTT TGCAACTGTT ATGAAAACAG TAAGGGTTGC GATAAGCATC TTCAATATGC TCATGATGGA AAGTAGGGTT GCTAAGCTTT CGTATGCAGA TGTCATAAAA AGACTCAGTG GGTTAGAGGA GAACGATAAA GCTTATATTT CTTCTGATCT CTTGGAAGTT GAGAGATATG TGGTCGTCCA TGGACAGATT ATCTTGCAGC TTTTCGAAGA GTATCCCGAC AAGGATATCA AAAGGTGTCC GTTTGTTACT GGTCTTGCAA GTAAAATGCA GGATATGCGC CACACAAAAT GGATCATCAA TAAGAAGAAG AAAATTTTGC AAAAGGGAAT GAATCTGAAT CCAAGGAGAG GCATGGCACC TGTGGTATCA AGAATGAAAG CTATGCAAGC AACAACAACT CGCCTTGTTA ATAGAATTTG GGGAGAGTTT TACTCCATTT ACTCTCCGGA GGATTCATTG GAGGCGGTTG ATGAAAATGT GGGAGAAGAG GAGCTTGAAG AGGTTGAAGA AGAGGACGAG GATGAGGAAG ATGATACAGA GGAGAATGTA CTAGATGCTG TTGAGGTTCA GAAGTCTCAC ACTCCGAAGA AAAGTAAAGC CAGTTCTGAA GAAATGGAAA TAGAGTGGGA CGGTGGAATT ATTGGGAAAA CTTCTGCTGG TGAGCCTCTC TATGGAAGAG CCCTTGTTGG AGGGGATGTG GTGGCGGTAG GTAGTGCTGT CATCTTAGAA GTTGATGATC CAGATGAAAC TCCAGTGATC TATTTTGTGG AGTATATGTT CGAAAGTTTA GATCACTGCA AGATGCTACA TGGTAAATTT TTGCAAAGAG GATCAGAGAC TGTTCTTGGG ATTGCTGCAA ACGAGAGGGA ACTATTCCTT ACTAATGAAT GTATTACTGT TCAGCTTAAG GACATAAAAG GAATAGTTAG TCTCGAGATT CGATCAGGGC AGTGGGGGCA TCAGTATAGG AAAGAGAACA TCGTCGTGGA TAAGCTTGAC CGGGCAAGAG CAGAAGAAAG AAAAGCTAAA GATTTGCCAA CAGAATACTA CTGCAAAATC TTGTACTCAC CTGAGAGAGG TGGATTCTTT AGTCTTCCAA GAAGTGATAT GGGTCTTGGT TCTGGATTCT GTAGTTCATG TAAGATAAGA GAGGATGAAG AGGAAAGGTC CAAAACTAAA CTCAATGATT CAAAGAGAGG CTTTCTCTCC AATGGGATAG AGTATTCTTC TGAGGATTTT GTTTATGTAA TCCCCAACTA CATAAATGAA GACGGTAAAA GAAGGCCAAG TTTTAAGTAT AGTCAGAACG TTGGGCTACA AGCTTTTGTG GTTTGCCAGT TAGTGGATAT TATTGTCCTA ACGGAACCCA AAAAAGGTAG TAAGGCTTCT TTTGAGGTTA ACCTGAGAAG GTTTTATAGG CCTGAGGATA TCTCTGTAGA GAAGGCCTAT GCTTCAGACA TCCAAGAGGT GTATTATAGC AAGGACACAT ATGTTCTCCC TCCAGACGCT ATAAAAGGAA AATGTGAAGT AAGGAAGAAA ACTGATATGC CCTTATGTCG TGAATATCCA GTATTAGACC ATATCTTCTT CTGTGAACTT TTCTATGACT CCTCCAATGG TTATCTCAAG CAGTTGCCTT CCAATATGAA GCTGAAGTTC TCTACTATTA AAGACGACAA ACTTCTAAGA GAAAAGAAGG GGAAAGGAGT AGAGAGTGAA ACTGACTCTG TGAAGCCAGA TGAGGCACCT AAAGAGATGC GTCTAGCTAC ACTAGATATT TTTGCTGGAT GTGGTGGCCT CTCTTATGGA CTAGAAAAGG CGGGTGTATC GGATACAAAG TGGGCGATCG AGTATGAAGA GCCAGCTGCG CAAGCTTTTA AACAAAACCA TCCTGACGCG ACGGTTTTTG TTGACAACTG CAATGTGATT CTTAGGGCTA TAATGGAGAA AGGTGGAGAT GTGGATGATT GTATCTCTAC TACGGAGGCA GCTGAACTTG CAGCTAAACT TGATGAGAAC CAGAAGAGTA CTCTGCCACT GCCTGGACAA GTGGATTTCA TCAACGGAGG GCCTCCATGC CAAGGATTTT CTGGTATGAA CAGGTTCAGT GACCGCTCTT GGAGTAAAGT CCAATGTGAA ATGATATTAG CATTCTTGTC TTTTGCTGAT TATTTCCGGC CAAAGTATTT TCTTCTCGAG AACGTGAAGA AAATTGTATC TTTCAATAAC GGGCAAACAT TTCAACTTAC GATCGCTTCT CTTCTTGAAA TGGGTTACCA GGTAAGATTT GGACTCTTGG AGGCAGGAGC ATATGGAATA TCTCAACCTC GTAAAAGAGC TTTCATTTGG GCAGCTGCAC CAAACGAAGT TCTTCCAGAA TGGCCTGAGC CGATGCATGT CTTTAATAAT CCGGGTTTCA AAATCTCACT ATCTCGAGGT TTGCATTGTG CTGCTGTTCA TAATACTAAA TCTGGTGCAC CTTTCCGCTC AATTACGGTG AGAGACACAA TCGGCGATCT ACCACCAGTG GAAAACGGAG AATCTGAGAT AAATAAAAAG TATAAAGATG TTCCAGTTTC ATGGTTCCAA AAGGAGATGA GAGGAAACAT GACTGTTCTC ACTGATCATA TCTGTAAGCA GATGAACGAA CTAAATCTCA TTCGCTGTAA GAAAGTCCCT AAGAGGCCGG GTGCGTCCTG GCGTGACCTG CCGGACGAAA ACGTGATATT ATCAAATGGA CTTGTGGAAA AATTGGTTCC ATTTGCTATG TCGAACAAAG CTAATGAGCA AAATCGGTAT AAAGGACTCT ATGGTAGATT GGACTGGCAA GGCAACTTTC CCACTTCCAT CACCGATCCT CAGCCCATGG GTTTTGTGGG AGTGTGCTTC CATCCTGACC AGGACAGAAT AATTACTATC CGTGAATGCG CCCGATCTCA GGGGTTTCCG GATAGCTATG AGTTTTCAGG GAAGAAAAAA GACAAACATA GGCAGATTGG GAATGCAGTC CCACCACCAT TGGCGTTTGC TCTCGGTCGG AAGCTCAAAG AAGCCCTACA TCTCAAGATT TCTCTTCAAC AACAATCCTA A
Length4521
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13460344.. 13466095
Download Sequence
A.thaliana
AGI-codeAT4G08990.1
DescriptionDNA (cytosine-5-)-methyltransferase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.4881 Ahg914348 Regulator of Vps4 activity in the MVB pathway protein
12.2882 Ahg323966
18.2209 Ahg494865 Pectin lyase-like superfamily protein
23.3666 Ahg327089 Proline-rich extensin-like family protein
26.3818 Ahg473700 transposable element gene
31.749 Ahg894454 Xanthine/uracil permease family protein
31.9374 Ahg351609 Protein of Unknown Function (DUF239)
34.7994 Ahg944327 zinc finger (C2H2 type) family protein
40.025 Ahg477911 NOD26-like intrinsic protein 7;1
45.7493 Ahg334132 Aluminium activated malate transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression