| Annotation |
|---|
| Description | jgi|Araly1|328336|fgenesh1_pm.C_scaffold_7000563 |
| Sequence |
ATGGAGATTT CCTCGGCCGA ATCGTTGTCC ATCTCTGGCG CGGCCGCTTC TGAGGTCGTC TCTGAGCCTT CCGTATCTTC TTCTTCTTCC TCTTCGTCGC CGAATCAGGC CTCCCCCAAT CCTTTGTCAA CCATGGATCC CGCAGTTGCG ACGGCGACAG GGTCGAGGTA CGTTGATGAT GACGAAGATG AGGAGGACGT GTGCAGGATC TGCAGAAATC CTGGCGATGC GGACAATCCG CTTCGGTATC CGTGTGCCTG TAGCGGGAGC ATCAAGTTTG TTCACCAGGA TTGTCTCCTT CAGTGGCTTA ATCACAGCAA CGCTCGTCAA TGCGAGGTTT GCAAGCATCC TTTTTCATTC TCCCCAGTGT ATGCTGACAA TGCTCCGTCA AGGCTCCCTT TCCAGGAGTT TGTAGTTGGC ATTGCTATGA AAGCTTGCCA TGTTTTACAG TTCTTTCTGC GGTTAAGTTT TGTGCTTTCT GTCTGGCTTC TCACTATACC TTTCATTACA TTTTGGATAT GGCGATTGGC TTTCGTGCGA AGTTTTGGTG AAGCTCAGAG GTTGTTCTTA AGTCACATCT CCACCACAGT AATTCTCACC GATTGCTTGC ATGGGTTCTT ACTATCGGCA AGTATTGTCT TCATCTTCCT TGGAGCTACT TCCTTAAGGG ACTACTTTAG GCATTTACGA GAGCTTGGGG GACAAGAAGA GAGAGAAGAT GATGGGGACA GAAATGGTGC TCGTGCTGCA AGAAGACCTG CTGGACAGGC TAATAGGAAT CTTGCTGGAG AGGGGAATGG TGAAGATGCT GGGGATCAGG GTGCTGCTGC TGGTCAGATT GTTAGAAGGA ATCCTGAAAA TGTTCTGGCA AGGTTGGACA TACAAGCAGC TCGTCTTGAG GCTCAGGTTG AACAGATGTT TGATGGGTTG GATGACGCTG ATGGTGCAGA AGACGTTCCA TTTGATGAGC TGGTTGGAAT GCAAGGTCCA GTGTTTCATT TGGTTGAGAA TGCCTTTACT GTTCTAGCAA GCAATATGAT ATTCCTTGGT GTTGTGATCT TCGTGCCCTT TACCTTAGGA CGAGTTATAT TGTATCACGT GTCATGGCTT TTTGCTGCTG CTAGAGGCCC TGCTGTGACT GCATCATTGC ATCTTATGGA TACCGGACTC TCATTGGAAA ATATTACTCT TCAGAGTGCG CTGACTGCTG TCTCAAATTT GACTAACGAA GGCCAAGAAA ATGGGCTACT TGGCCAGCTC ACTGAGATGA TGAAAGTCAA CGGAAGTGAA TTGAATGGAG CAAACAATAC GCTATCGGTT GCTACTGATC TCCTGAAAGG TTCTGCTGTT GGGGCCTCAA AGCTATCTGA TATTACAACT CTGGCTGTTG GGTACATGTT TATAGTATTT CTGGTGTTCC TTTACCTGGG GATCATTGCA CTGATTCGAT ATGCCAAGGG TGAGCCACTG ACCGTTGGAA GATTTTATGG TATTGCATCT ATAGTAGAAG CTGTACCATC CCTCCTTAGA CAGTTCTTGG CAGCAATGAG GCATCTGATG ACAATGATCA AAGTTGCCTT TCTTTTGGTC ATCGAGCTTG GGGTCTTTCC TTTGATGTGT GGGTGGTGGC TAGATGTTTG CACCGTTAGG ATGTTTGGTA AAACAATGTC CCACAGAGTA CAGTTTTTAT CAATTTCTCC ACTGGCAAGC TCACTTGTTC ATTGGGTTGT TGGTATCATG TACATGTTGC AAATAAGCAT CTTCGTCAGC CTTCTACGAG GGGTTCTTCG CCCTGGAGTT CTGTATTTCC TTCGTGATCC AGCAGATCCT AATTACAATC CATTCCGAGA TTTGATTGAT GATCCAGTGC ACAAGCATGC TCGTAGAGTA CTGTTATCTG TTGCAGTGTA TGGAAGTTTG ATTGTCATGC TGGTATTTTT ACCAGTCAAA CTTGCGATCC GGATGGCTCC TTCAATCTTT CCACTCGACA TATCTGTATC CGACCCATTC ACTGAGATTC CGGCCGACAT GCTTCTGTTT CAAATATGCA TTCCATTTAT CATCGAGCAT TTCAGACTTC GGACCACAAT TAAGTCCCTT CTACGCTGCT GGTTCACTGG TGTTGGCTGG GCACTTGGTT TGACAGACTT CCTCTTGCCA AGACCAGAGG ACAACATTGG TCAGGACAAT GGAAATGGTG AACCAGGAAG GCAGAACAGA GCACAAGTAT TGCAGGTGGG AGGACCTGAC AGGGCCATGG CTGCGCTCCC AGTAGCTGAT GACCCTAACA GAAGTCGCCT CCGTGCTGGG AATGTCAACA CGGGTGAGGA ATATGAAGAT GATGAAGAAC AATCTGATTC AGACAGGTAC AACTTTGTCG TCAGGATAAT CCTCCTTCTA CTTGTTGCAT GGGTGACTCT TCTTCTCTTC AATTCAGCAT TGATAGTTGT ACCAGTTTCG CTTGGACGTG CTCTATTCAG TGCCATCCCA ATTCTTCCAA TAACTCATGG CATCAAATGC AATGACCTGT ATGCTTTCGT CATTGGTACA TATGCCTTTT GGACTACCAT ATCTGGGGCC AGGTATGCTA TTGAGCATGT CAAGTCAAAG AGGACTTCAG TCTTGCTTAA CCAAATATGG AAATGGTGTG GGATTGTTTT CAAGAGCTCG GTGCTGTTAG CCATATGGGT TTTTATCATT CCGGTGCTAA TTGGACTTCT GTTTGAGCTT TTGGTTATTG TCCCAATGAG AGTCCCAGTT GATGAAAGCC CTGTCTTCCT CCTGTATCAA GACTGGGCTC TTGGGCTCAT CTTTTTGAAG ATCTGGACTA GACTGGTAAT GCTGGATCAT ATGCTTCCAA TAGTGGATGA TAGCTGGAGA GCAAAGTTTG AGCGGGTAAG AGAAGATGGC TTCTCGAGGC TTCAAGGGTT ATGGGTACTT AGAGAGATTG TGTTTCCGAT CGTGATGAAA CTCCTAACGG CTTTATGCGT GCCTTATGTG TTGGCGAGAG GAGTGTTCCC AATGCTCGGA TATCCGCTAG TAGTGAACTC AGCGGTCTAC AGATACGCAT GGATAGGTTG TCTCTCAGTT AGCCTCTTCT GCTTCTGTGC AAAAAGATGC CATGTCTGGT TCAGAAACCT TCACAACTCT ATCCGTGATG ACCGTTATCT CATTGGTCGG AGACTGCATA ACTTTGGGGA AGCTGCTTTG GCAAATCAAA ACCAAAACCA AAGTAGTGAG GATGCAGGAG ATGGTGTCCT GATAGGACGT GAGGGAGATG TTGATAATGG ACTTAGGCTC AGACGTGCAA TCCAACAAGA AGCTTAG |
| Length | 3327 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2777399.. 2781740 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G34100.1 |
| Description | RING/U-box superfamily protein |
| TAIR curator summary | |
| Alias | [CER9][SUD1][ECERIFERUM 9][SUPPRESSOR OF DRY2 DEFECTS 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg920751 | HCP-like superfamily protein |
| 1.41421 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 2.82843 |
Ahg480360 | vacuolar sorting receptor 4 |
| 4.24264 |
Ahg496189 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 5 |
Ahg358235 | RNA binding (RRM/RBD/RNP motifs) family protein |
| 5.47723 |
Ahg486249 | |
| 7.2111 |
Ahg477999 | acyl-CoA dehydrogenase-related |
| 7.34847 |
Ahg490219 | pre-mRNA splicing factor-related |
| 8.24621 |
Ahg942891 | global transcription factor C |
| 9.69536 |
Ahg472680 | SIN3-like 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|