Detail



ID : Ahg471290

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471290|fgenesh2_kg.1__1244__AT1G11545.1
Sequence
CACTCACGGA ACAAGCGTAA ATTGCATTAT CTCTCTCTCT TCGAAATATT CGAAGCAGAG ACAACCAATG GAGACGCAAA GGAGAATAAT CACAAGCTGT TCTTCCATGG CCGCTCTTTT CGTGTTCATG ACGGCTCTAA TAGCGTCTTG TTCTTCTATC ACAGCAACAC CGACACAATC CTTTGAAGAT AATTTCAACA TTATGTGGTC TGAAAATCAC TTCACGACTT CCGAGGATGG AGAGATCTGG AATCTTTCCT TAGACAACGA CACCGGATGT GGATTTCAGA CAAAGCACAT GTATAGATTC GGATGGTTCA GTATGAAGCT TAAGCTCGTA GGCGGCGACT CCGCCGGCGT CGTCACCGCT TACTACATGT GTTCAGAGAA TGGGGCAGGA CCGGAGAGAG ACGAGATAGA TTTCGAATTT CTAGGGAACC GAACCGGACA GCCTTACATT ATTCAGACCA ATGTGTATAA GAACGGAACC GGGAATCGGG AGATGCGACA TTCCCTCTGG TTCGACCCGA CCAAGGATTA CCACACCTAC TCAATTCTTT GGAATAACCA CCAGCTCGTC TTCTTCGTGG ATAGAGTACC GATTCGAGTG TACAAGAACA GTGATAAGGT ACCAAACAAC GATTTCTTCC CAAACCAGAA GCCGATGTAC TTGTTCTCTA GCATTTGGAA CGCTGATGAT TGGGCGACAC GTGGCGGTCT CGAGAAGACT GACTGGAAAA AAGCTCCGTT CGTCTCTTCT TACAAGGACT TCGCCGTCGA AGGCTGCCGT TGGAAGGATC CATTCCCTGC ATGCGTCTCC ACCACAACAG ATAATTGGTG GGATCAGTAC GACGCATGGC ATTTGTCCAA GACACAGAAG ATGGATTATG CGTGGGTGCA GCGTAATCTC GTCGTATACG ATTATTGCAA AGACAGTGAG AGGTTCCCTA CTCTTCCTTG GGAGTGTTCC ATTAGCCCTT GGGCTTAAAA TCAATTTTGT TTTTTGAGTG TATTAATTCA GTGGAAATGG TTAATGTAAT AATTTTACCT TTTTTTTGTA TTTCTTATTT TGTTATGGAT TATATATCCT CTGTTTATTT ATTTAATTAA TTATTTATTC AGTCGGCTAT 
Length1130
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4413688.. 4415470
Download Sequence
A.thaliana
AGI-codeAT1G11545.1
Descriptionxyloglucan endotransglucosylase/hydrolase 8
TAIR curator summary
Alias[XTH8][xyloglucan endotransglucosylase/hydrolase 8]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg480606 EXORDIUM like 5
6 Ahg479888 xyloglucan endotransglucosylase/hydrolase 16
7.74597 Ahg483654 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
7.81025 Ahg938360 Eukaryotic aspartyl protease family protein
9.32738 Ahg493497 xyloglucan endotransglucosylase/hydrolase 15
10.6771 Ahg489716 Phosphate-responsive 1 family protein
11.4891 Ahg470382 HAD superfamily, subfamily IIIB acid phosphatase
11.6189 Ahg470362 FASCICLIN-like arabinoogalactan 9
13.1149 Ahg471170 xyloglucan:xyloglucosyl transferase 33
14.4914 Ahg933489 TRICHOME BIREFRINGENCE-LIKE 45
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression