| Annotation |
|---|
| Description | jgi|Araly1|933489|scaffold_401477.1 |
| Sequence |
TTCTTTTTCT CAAGCTTCTT TAATGGCGGC TGTTCAATGT CTCACTTTCC TCTTCTTGTT TCTTCTCCAA AATGCCACGT CAGCTTCACC TCTCCCTTTC TTCCGGCGGC CGAACCAAAG CAACTTCGCT AAGCATCCTC GCCGGAATCC GGTGATTCTT CCGGTGAATC ACAGTAGTTG TGATCTGTTC GCCGGAGAGT GGGTGCAGGA TGAGACGTAC CCGCTTTACC GGGCTAAAGA ATGTGGCGGA GGAATCATAG ATCCGGGATT TGACTGTCAG ACGTACGGCA GACCTGACTC CGACTATCTC AAGTTCCGGT GGAAACCATT CAACTGCAAT GTCCCTAGAT TCAATGGGGT GAAGTTTCTA CAAGAAATGA GGGACAAAAC GATAATGTTC GTTGGTGATT CATTGGGTAG AAACCAATGG GAGTCGTTGA TCTGTATGAT CACTTCATCA GCACCGTCCA TTAATACACA CATCATTCAT GAAGATCCTC TCTCTACCTT CATGATCCTT GACTACAACG TGAAAGTGTC ATTCTATAGA GCTCCTTATC TTGTAGACAT AGACAAAATT CACGGAAAGA CAACTCTTAA ACTCGACGAA ATCTCTGTCG ATGCATCGAC CGCTTGGCGC ACAGCCGACG TTCTATTGTT CAACACTGGT CACTGGTGGA GCCACACAGG GTCTTTACGA GGGTGGGAGC AGATGGAGAC AGGAGGGAGA TATTACGGCG ACATGGATAG GTTAGTGGCG TTGAGAAAAG GACTAAGAAC ATGGTCTGGT TGGGTCCTTC GTTATATCAA TTCGCCTCTC ACTAGAGTTT TCTTCCTCTC CGTCTCACCC ACACACTACG ACCCAAATGA GTGGACTTCA AGATCAAAAA CTTCAACGAT AACTCAAGGA GCTAAAAGCT GCTACGGACA AACGACACCG TTTAGTGGAA CATCGTATCC AACAAGTTCT TACGTAAACC AAAAGAAAGT TATTGACGAC GTGGTTAAAG AGATGAAGTC TCATGTCTCA TTGATGGATA TAACTATGCT CTCTGCTCTT CGCGTCGACG GTCATCCTTC GATATATAGT GGAGATCTCA ACCCTTCTTT TAAAAGAAAT CCTGACCGTT CTTCTGATTG TAGCCATTGG TGTCTTCCTG GTCTCCCTGA TACGTGGAAC CAATTGTTTT ATGCTGCTTT GTTGTATTAA TATTTGATTA ACCAAGATCA |
| Length | 1230 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13229494.. 13232268 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30010.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 45 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL45][TRICHOME BIREFRINGENCE-LIKE 45] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.43398 |
Ahg945946 | SKU5 similar 4 |
| 12.4097 |
Ahg940511 | MATE efflux family protein |
| 12.6491 |
Ahg941866 | Leucine-rich repeat (LRR) family protein |
| 14.4914 |
Ahg471290 | xyloglucan endotransglucosylase/hydrolase 8 |
| 15.8745 |
Ahg470654 | Fatty acid desaturase family protein |
| 24.8998 |
Ahg948737 | HAD superfamily, subfamily IIIB acid phosphatase |
| 27.0185 |
Ahg489494 | Pectinacetylesterase family protein |
| 28.775 |
Ahg480375 | arabinogalactan protein 9 |
| 29.6985 |
Ahg935472 | Plant-specific transcription factor YABBY family protein |
| 29.6985 |
Ahg935057 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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