| Annotation |
|---|
| Description | jgi|Araly1|471314|fgenesh2_kg.1__1268__AT1G11750.1 |
| Sequence |
TAACCTTCAG CCTTGCCGTC CTCTGTCATC TATCCACGCC TGAACCCGAA AAACTCAGAA AATTGAGCTC TGGTAATGGC GGGTTTGGCA ATTTCACCTC CTCTCGGTCT TTCCTTCTCT TCTCGAACTC GAAACCCTAA ACCCACTTGG TATCTATCTC ACAATCAAAG GAATCCTATA AGACGTATAG TTTCTGCTCT ACCGAGTCCA TATGGAGATT CTCTGAAAGC TGGACTTTCT AGTAATGTTT CTGGATCCCC AATAAAGATT GACAACAAGG ATCCAAGATT TGGAGTGATA GAGGCGAAAA AAGGAAACCC GCCAGTAATG CCTTCAGTGA TGACCCCTGG AGGACCTTTA GACCTCTCTT CTGTGTTATT CCGTAACCGC ATAATCTTCA TCGGGCAACC AATTAACGCT CAAGTTGCTC AGCGAGTCAT ATCTCAGCTT GTAACCCTTG CATCTATTGA TGATAAATCC GACATCCTGA TGTACTTGAA TTGTCCCGGT GGCAGCACCT ACTCTGTCTT AGCAATTTAT GACTGTATGT CTTGGATAAA GCCTAAAGTT GGAACAGTGG CATTTGGAGT AGCTGCAAGC CAAGGAGCTC TTCTTCTTGC TGGAGGTGAA AAAGGAATGC GCTATGCAAT GCCTAATACT CGTGTCATGA TACATCAACC ACAAACTGGA TGCGGAGGAC ATGTGGAGGA CGTGAGGAGA CAGGTGAATG AAGCCATCGA AGCCCGACAA AAAATTGACA GGATGTATGC TGCTTTCACT GGACAACCTC TCGAGAAAGT GCAGCAATAC ACTGAAAGAG ATCGTTTCTT ATCCGCATCT GAGGCGCTTG AGTTCGGGCT CATTGATGGT CTATTGGAAA CAGAATACTA AAACAGCTTA CAGGACAATG CACAGAGACA GCTCATTGCA ATGTTCAAAG CTTCCAATTT CATTTGAATA TGAACAATTG TAACTGATAT TTGTGCATAA ATCAGTTTGG TTTTCTTGGC TTTACAATCT ACTAAACAGA AATGAGAAAA CTAAACTGGT TCTTTTTTAC CGAAAAATCT GAAAGTTTTA TGTTCTATTT TTGTTTACAC ACGATAACCA AGCAGACCGG AACTTTATGG AAAACCAGAT TGGTTAGGTC CAGCTTGTTA CTTACTAAAT CCTATACAAT GGCAAGGCGT AAGTTGCTTT GGTACATAG |
| Length | 1209 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4519604.. 4522061 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G11750.2 |
| Description | CLP protease proteolytic subunit 6 |
| TAIR curator summary | One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). |
| Alias | [CLPP6][NCLPP1][NCLPP6][CLP protease proteolytic subunit 6][NUCLEAR-ENCODED CLPP 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9 |
Ahg490278 | GTP-binding family protein |
| 10.4881 |
Ahg491796 | atypical CYS HIS rich thioredoxin 2 |
| 18.4932 |
Ahg348313 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 21.1424 |
Ahg488058 | Rho GTPase activation protein (RhoGAP) with PH domain |
| 28.931 |
Ahg918907 | nuclear encoded CLP protease 5 |
| 29.7321 |
Ahg474606 | chaperonin 60 beta |
| 36.2215 |
Ahg485670 | Thioredoxin superfamily protein |
| 39.3446 |
Ahg475984 | Ribosomal protein PSRP-3/Ycf65 |
| 39.8372 |
Ahg493211 | O-fucosyltransferase family protein |
| 42.7083 |
Ahg483116 | Ribosomal protein S26e family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|