| Annotation |
|---|
| Description | jgi|Araly1|471420|fgenesh2_kg.1__1374__AT1G12700.1 |
| Sequence |
TCTTTGAGAT TGGTTCAGCC TCATCTCTTG GATACAGGTA CTCTTAGAAC TGATTTTCTC TGTACCATTT CTGGTATTAG CGATGGGAGA GTCTGTTTCA GAGAGAGATT GAGAAGTGGG ATTGTTGATA TTAAGGAAGA TGATGCTATT GATCTGTTTC AAGAAATGAT TAAGTCTCGT CCTCTTCCTA GTCTTGTTGA TTTCAGTAAA TTGTTTAGTG GTGTTGCAAG CACAAAACAG TTCAATCTCG TTTTAGATTT CTGCAAGAAG ATGGAATTGA ATGGGATTGC TCATAATATC TACACTTTGA ATATCATGAT CAATTGCTTT TGCCGGTGTT GTAAAACTTG TTTTGGTTAT TCTGTTTTGG GAAAAGTTAT GAAGCTTGGG TATGAGCCTG ACACAACAAC GTTTAACACT CTGATCAATG GACTCTGTCT CGAGAGTAAA GTTTCTGAAG CTGTGGTTTT AGTCGCTAGG ATGGTGGAAA ACGGATGTCA ACCCGATGTG GTTACTTATA ATTCGATTGT GAATGGGATA TGTAAATCAG GAGATACTTC TTTAGCCTTG GATTTGCTCA GAAAGATGGA TGAAAGAAAT GTTAAGGCTG ATGTGTTTAC TTACAGTACA ATCATTGATA GTCTTTGTAG AGATGGTTGC ATAGACGTTG CAATTAGCCT TTTCAAGGAA ATGGAAACGA AAGGTATCAA ATCTAGTGTT GTTACGTATA ATTCTCTTGT GGGAGGTCTT TGTAAAGCCG GTAAATGGAA TGATGGTGTG CAGTTGTTGA AGGATATGAC GAGTAGGAAA ATCATCCCTA ATGTCATCAC TTTCAATGTA TTGATTGATG TTTTTGTTAA AGAAGGGAAG CTTCAGGAGG CTAACGAATT GTACAAAGAG ATGATCACAA GAGGTATATC ACCTAACACT ATTACTTATA ATTCCTTGAT GGATGGGTAT TGTATGCAGA ACCGTCTTAG CGAGGCCAAC AATATGTTGG ATCTTATGGT TAGGAATAAT TGCAGTCCTG ATATCGTGAC TTTTACAAGT CTCATTAAAG GATATTGTAA GGTGAAAAGG GTTGACGAAG GTATGAAACT CTTCCGCAAG ATTTCTAAGA GAGGCTTGGT TGCCAATACA GTTACCTATA GCATTCTTGT CCAAGGGTTT TGTCAATCCG GGAAACTAGA GATCGCGGAG GAACTTTTCC AAGAAATGGT TTCACTCGGT GTTCTTCCTG ATGCTATGAC ATATGGTATT TTGCTTGATG GCTTGTGTGA CAATGGGAAG CTTGAAAAGG CATTGGAAAT TTTTGAGGAT TTGCAAAAAA GTAAGATGGA TCTTGATATT GTTATGTATA CAATCATCAT CGAGGGGATG TGCAAGGGTG GAAAAGTGGA AGATGCCTGG AATTTATTCT GTAGCCTACC TTGTAAAGGA GTGAAGCCTA ATGTTATGAC ATACACCGTG ATGATTTCAG GATTATGTAA GAAAGGGTCA CTATCTGAAG CAAACATCTT GCTTAGAAAA ATGGAGGAAG ATGGGAATGC GCCAAATGAT TGTACATACA ACACACTAAT CCGGGCACAT CTCCGAGATG GTGACTTAAC TGCATCAGCT AAACTTATTG AAGAAATGAA GAGTTGTGGG TTCTCAGCAG ATGCTTCCAG TATTAAGATG GTTATTGATA TGTTATCGAG TGCGGTTTGG TGGTTCAAAG AGCCGAGAAG ATCTCCTGGT GTTAAGCGTT TCAGAGGAAC TCAGGCTTAC CTAATGCCCT TCGATACTAT TACTGCATCT CTAAACTTCA AAACGATCGA AGCTCATGGT ATGAGCTCCG CAGAACTGCA TAGAGATCTC AGGCAGGTAG GGAGATCAGA GGTTCTAAAG AAACGCTCGG CTCGGGGTTT GGATGATGCG GAATGTGATC TCATGGTTGA TCTTGAGCTT CCAACAGATG CGGTTCACAA TGCTCATCGA GCTGGAAAAA TGAGAAGATG CG |
| Length | 2002 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4966335.. 4968761 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G12700.1 |
| Description | ATP binding;nucleic acid binding;helicases |
| TAIR curator summary | |
| Alias | [RPF1][RNA processing factor 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14 |
Ahg479847 | Splicing factor 3B subunit 5/RDS3 complex subunit 10 |
| 26.8887 |
Ahg313276 | transmembrane receptors;ATP binding |
| 29.7321 |
Ahg937129 | metalloendopeptidases;zinc ion binding;DNA binding |
| 37.4166 |
Ahg475737 | Signal transduction histidine kinase, hybrid-type, ethylene sensor |
| 59.3717 |
Ahg471977 | tetratricopeptide repeat (TPR)-containing protein |
| 59.808 |
Ahg481823 | RHOMBOID-like 1 |
| 61.041 |
Ahg328832 | Leucine-rich repeat transmembrane protein kinase family protein |
| 68.8912 |
Ahg475062 | Pentatricopeptide repeat (PPR) superfamily protein |
| 70.0571 |
Ahg491170 | Plant neutral invertase family protein |
| 78.9937 |
Ahg945443 | elongation factor P (EF-P) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|