Detail



ID : Ahg471977

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471977|fgenesh2_kg.1__1931__AT1G17680.1
Sequence
AAAGAGAGTT TTTGATTTGT TTATTCTTCT CTTGTTGAAA CTTGAAAGGA TGGAAGATAA GGGAAAGGGT GTGGTGGAAG GAGATGAGGG AAACTTAGAA GAAGGTCCAA GCAACATGGA ATGTGACAAG GAAGTACTTG GTGGTGATGA TAAAGACAGT GATGAAGAAG GTCTGGTAGA TGATGATGAT GATGATGATG ATGATAGTGA TGATGATGAT GAGGGAGATG AGTCAGAAGA AGAAGAAGAT GACTTTGAAG CTGGAAGTGA AATTCCAAAC ACGTTTGAAC CACTTGAGTA TGAAGCTCTG GCTGAGAGGA AACGCAAAGC ACTGGCTGAT TCTCAACGTA ATGCTATTAA CATCTCGAAT AGCACCTCAG GCGTGGAGGG ATTCATGGAA TTTTTGTCTT CTGGTCGCCG ACGGAAATCC AGGAAGTATA AAAAAAAGGG TAGAAGACTT GGGTCAAAGA AAGAAGTTGC ACCTGACATT CTAAAGAGGT TTAGGGAGGC TCTTTTTCTT CATGCACACG GCCGTGATAT TGAGGCTTTA CCTATTTTAG TAGAAGTTAT TAAGCAAGCA CCAGCTTTCG ATATAGCATA CTATTATCTT TCACGTGTTT CTGAGCAACT TGGTAGGGCC GAATCATCTT CTACGGAAGC ATTAAAGATT GCTGCAAATA TCAAAGGTTC AAAATCACCT TTTTGGAAAT TGCTTTATGA GAGGTTCAAG GAACAAGAGG ACATGGCGGT AGCAAGGAGT TATGCTTCCA AAGCAATACA AGCTGATCCA GATGATATCC CTTTGAAATA TGAATATGCT GACCTCTGCC TAAATGCTGG AAAATATAGA GAAGCTGCTG AAACCTATGA GCAAATATTT CGTCGGTGTC CTGAGAGAAT TGAAGCACTC AAGTGGGGGA TAGAGTATTT CCTTAAATCC GGTGAGGGTG AACGAGCAGC GAGCATCTTA GAGGATCATA TTAAATCCCA TTCATCTGAA GTGGGGCACG ATATCTTGGA TTTACTGGCT TCAGTTTTCA TGCAAATTAA TGTGCATGAT AGAGCTCTTA AGTATATTCA TGATGTGCGC CAGATTTACA ATGTTGGAAA AGAACTGTCT TCCAGCTTGA AAATCAGACA AGCCATCTGT CATGTTCACC TTGAAGAAAT GGAGCAGGCA GAGAGTGTGT TAAGTATTCT ACCACAGGAG GCTGTATCTG AACATCCAGA GCTCATTACC AATTTGGCTG ATGAGCTAAC AAACATTGGG AATTTCCACT CTGCTCTCAA ATACTATTTA GAAGCAATCA GTGAACCTGT GAATAATGGC TATTTGTTTG TGAAAATTGC TCGCTGTTAT ATGTCATTGG CAGAACGAGA ACAGGCCATT GTTTTCTATT ATAAAGCTCT GAATGAACTC AGTGATACGG TTGATATTCG CATAACTCTG GCTTCACTCC TCCTTGAAGA TGGCAAACGA GATGAAGCTG TATTAGTGCT TTCTCCTCCG GAAAATCCAG ATCCTGATAC TGCTAAACTG AAGGCATGGT GGAAAAACAG AAAGATCAGG ATGAATCTTT GTCAGATCTA TCATTCAGAG GGAATGCTTG AGGACTTCGC CAATACAGCA CTGCAGTTGG TACTTAAGTG GGTTTGGCGG CGGACGGTCA AGGGGAAAAG AAAACGACTG GTTCTTTCAG AGCATCAAAG AAACAAAAAA CGCCGACGTC CTAGAGATGC TCAAGCTTCC CAGTTGAGAG GCGGACCAAA AAAGTGGCGC AAAATCAGGG CAACATTAAA TGAAACAAGA AGAATTAGAG AACGAGCTGC TATCAAAGCT CATAACGAAG ATATCTGCAG TGAATCTGAG GAAGAAGTTA TCAAGGATGA AGAGTATCAC CGTCTCTTTG TGGATTTGTG CAAGGCATTG GCATCCCTGC AGAGATATTG GGAAGCTCTG GAGATAGTTA ATTTGGCTCG GAGATTGGAT GCTAAAATGC TGCCTGTTGA GACAAAAAAG GAGCTTCAGT CACTTGGAGC TAAAATATCG TGCGATACTA TGGATCCAAA GCAGTGGTTT GACTGTGTAA GATCTGTCAT TCAGCAACAT CCATATCGTT TGAATGCCTG GAACTGCTAT TACAGAGTCA TTTCAAGACT AGGGAAAAGA GCATCGACTG AAGCTAAGTT CATGCATCAC TTAAGGAGCA AGTACCGAGA TTGCGTACCG CCCATTCTAA TTGCTGGTCA TCACTTTACC GTGACAAGCC GACATCAAGA TGCTGCAAGA GAATACCTTG AAGCATATAA ATTAATGCCT GATAGTCCTT TAATTAACCT GTGTGTGGGA GCTGCTTTAA TCAACTTAGC CCTCGGTTTT CGACTCAAAA ACCGACATGA GTGTCTTGCT CAAGGCTTTG CATTTCTGTA CAACAATCTC AGAATTTGCA GTGACAGTCA GGAGGCGTTG TATAACGTTG CTCGAGCGTA TCAGCATGTG GGACTAGTGA CTCTTGCAGC TTCATACTAC GAGAAGGTTT TAGCGATTTA CGAGAAAGAA TACCTGATGC CGAAACTCCC TAACGAGGAT CCGAATGTTG CAGAAGAGCG GAAGCCTGTG AATTGTGATC TCCGCAAAGA AGCTGCACAC AATCTGCATT TGATCTATAA GCACAGTGGA GCAGTTGATC TCGCGAGGCA AGTCTTAAAG GATCACTGCA GTTTCTGAGT CTCCTTATCA TTGTCGTTTT TTTTTTAAAC GAAGATAAAA CACTAGGAAA CCACCCTATT TTATATGTTC CAAACAAAGT TTGTTTTTCA TGCATTTATT TAGTTTTCTC ACAAAACTTG ATCTGGATAT TGC 
Length2863
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7070806.. 7076966
Download Sequence
A.thaliana
AGI-codeAT1G17680.1
Descriptiontetratricopeptide repeat (TPR)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg340056 Chaperone DnaJ-domain superfamily protein
3.16228 Ahg912993
3.4641 Ahg477943 chromatin-remodeling protein 11
6.63325 Ahg474348
13.9642 Ahg926973 VPS35 homolog B
17.3205 Ahg328837 no pollen germination related 2
20.347 Ahg490301 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
22 Ahg317971 ubiquitin-specific protease 13
22.2486 Ahg344326 RED family protein
22.4499 Ahg485239
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression