| Annotation |
|---|
| Description | jgi|Araly1|477375|fgenesh2_kg.3__76__AT3G01480.1 |
| Sequence |
ATTCAAAAAT CCGACGCAGA CATTTCTCAT GTTCTTTTCG GACAGAACAA AAACTCCCTA ATCCAATGTC AATTCCTTTG GTCTGTCTCT GAAAAATCAT CTCTCTCCAA ACCCTTTTTC AATTTTAACT ATCGATCTCC AATGGCGGCG GCGTTTGCCT CTCTTCCCAC ATTTAGTGTC GTCAATTCCT CCAGATTTCC CAGAAGAAGA ATCGATTTTT CTTGCTCCAA AAAACCCCTC CAAGTTCGTT CTTGTTCCGG CAACACTCGT GAAAATAAGC AGAGAGGGAC ATTTGCATCA TTGAAAGAAT GTGCCATTTC ATTAGCTTTA TCGGTTGGTT TAATAGCTTC AGTACCTTCG ATTGCTTCGC CTCCCAATGC TTACGCAGTG ACGAATCCAG CGATTCCAGA TGTTTCGGTG TTGATCTCTG GTCCTCCGAT TAAAGATCCA GAAGCTTTAC TAAGATATGC ATTGCCTATT GACAATAAAG CCATCAGAGA AGTACAGAAG CCTCTTGAGG ATATCACTGA TAGCCTCAAG ATTGCTGGCG TTAAGGCTCT CGATTCTGTT GAACGGAATG TGAGGCAGGC AAATAGATCA TTGCAGCAAG GGAAAACTAT GATTGTGGCA GGTTTTGCTG AATCGAAGAA GGATCATGGT AATGAAATGA TCGAAAAGTT GGAAGCTGGT ATGCAAGATA TGCTAAAGAT TGTGGAAGAT CGTAAAAGAG ATGCGGTTGC TTCAAAACAG AAAGAAATTC TCAAATATGT TGGCGGAATA GAAGAGGATA TGGTTGATGG CTTCCCATAT GAAGTGCCGG AAGAGTATCG GAACATGCCT CTTCTCAAAG GAAGAGCCAG TGTGGACATG AAGGTCAAGA TCAAGGACAA TCCCAACATC GAGGACTGTG TGTTCCGCAT TGTTCTTGAT GGTTATAACG CCCCTGTTAC TGCGGGGAAT TTTGTGGACT TGGTAGAGCG GCATTTCTAT GATGGCATGG AGATCCAGAG ATCTGATGGA TTTGTGGTAC AAACAGGAGA TCCAGAGGGT CCTGCGGAAG GATTTATCGA TCCAAGCACA GAGAAAACGC GGACGGTTCC TCTAGAGATT ATGGTGACTG GAAAGAAAAC GCCTTTTTAC GGCTCAACTC TTGAAGAACT GGGTCTTTAC AAGGCTCAGG TTGTGCTTCC TTTCAACGCA TTTGGGACAA TGGCAATGGC AAGAGAAGAG TTTGAGAATG ACTCAGGATC AAGCCAAGTG TTTTGGCTGC TAAAAGAGAG CGAGCTGACT CCAAGCAATT CCAACATCTT GGACGGTCGT TACGCTGTCT TTGGTTACGT TACTGACAAC GAAGATTTTC TTGCTGATCT TAAAGTTGGT GATGTTATTG AATCCATTCA AGTTGTCTCC GGTTTAGAGA ACCTCGCTAA CCCGAGTTAC AAAATCGCCG GTTAACTTCG CTTATATTTC CCTTTTCTTG GTTCATAGTA AGTAATACTC TGTTTATTTT TAATTTTGTG AGAGTAATTT AAAAGGTGCA TCACTTTTTA TATAATTATG AATAGTTTGA ATTT |
| Length | 1574 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 212014.. 214353 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G01480.1 |
| Description | cyclophilin 38 |
| TAIR curator summary | Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes. |
| Alias | [ATCYP38][CYP38][ARABIDOPSIS CYCLOPHILIN 38][cyclophilin 38] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.0905 |
Ahg471443 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 |
| 13.4164 |
Ahg482332 | Ribosomal protein S5 family protein |
| 21 |
Ahg492365 | 31-kDa RNA binding protein |
| 23.1517 |
Ahg484358 | ribosomal protein L15 |
| 24.8193 |
Ahg473113 | Ribosomal protein L34 |
| 25.4558 |
Ahg908768 | Nucleic acid-binding proteins superfamily |
| 25.632 |
Ahg474896 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
| 25.7876 |
Ahg484368 | Thioredoxin superfamily protein |
| 30.8545 |
Ahg934663 | NAD(P)-binding Rossmann-fold superfamily protein |
| 31.4643 |
Ahg951910 | photosystem II subunit T |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|