Detail



ID : Ahg471578

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471578|fgenesh2_kg.1__1532__AT1G14170.3
Sequence
TATTTAATAT ATAGACGTTA GCCCCAAAAC TTGTATTTCT CTGCTTTCAA ACCCAAAAAG CCAAAAAAAA AAACCATTGA AGCAGCAGCC GAAGAAGCGG TCACATTTTC CGGCTAAACG GACAGATCGA CCAGTGAAAG CTCCCATCAC TTCCTGCAGC ATTGTGATTG TTTCTTGTTA AAATGGCTAG TACTCTGAGG AACGTTCATG GTAAGAGATC TAATTTCCAA TCTGAGTTTA CTGGAAATGG AGGAAGTAAG AGAAGAAATC TTCATGATGA TACAGATCAA AATGTTATTG GGTCAGAAGA AACTGTGTAC CGCTACTTGT GCCCCGTGAA AAAGACCGGG AGCATTATCG GGAAGGGTGG CGAGATCGCT AAGCAGATAA GGTCTGATAC AAAATCAAAC ATGAGGATAA ACGAGGCTTT ACCCGGTTGT GAAGAGCGTG TTGTTACCAT ATATTCCACT AATGAGGAGT TGAATCATTT TGGAGATGAT GGTGAGCTTG TTTGTCCTGC TTTAGATGCT CTTTTCAAGG TTCATGACAT GGTTGTAGCG GACACTGATC ATGATGATGG TAATGATGAT GATGATCTTG GTGAAAAACA AACGGTTACT GTTAGGATGC TCGTACCGTC TGACCAAATT GGTTGCGTTA TCGGGAAAGG AGGGCAAGTC ATCCAGAATC TGCGTAATGA AACCAATGCT CAGATTCGTG TCATCAAAGA TCATCTACCT TCTTGTGCTT TGACTTTGAG TCATGATGAG CTTCTTCAGA TAATTGGAGA ACCTTTGGTT GTTAGAGAAG CTCTTTATCA AGTAGCTTCC CTGCTTCATG ATAATCCGTC ACGATTTCAA CACTTACTCC TGTCTTCTTC AAGTTCTATG CATCAACCTG GTGCAATGTT AATGTCTGCA GCGCTAACGA GCTCTCACAG AAACTACGCT GTGCGTAGAG ATATAGCAGA TGCAAGGGAG TTTTGTGTTT GCTTCATCTG TCCAGCTGAA AACGTTGGAG GTGTAATTGG AAAAGGTGGT GGTTTCATTA ATCAGATCAG GCAAGAAACT GGTGCTACGA TTAGAGTCAA TACCTCAGAA ACTGATGAAG ATGATTGCAT AATTTTCATA TCATCAAAAG AGTTCTATGA AGATCAATCT CCAGCGGTGA ATGCAGCAAT ACGCTTACAA CAGCGATGCA GTGAGAAAGT GGGTAAAGAT GCAAATGATT TAGCATTCTC TACGCGTTTA CTTGTATCGA GTTCCCAAAT CGGGTGTCTC ATTGGAAAAG GTGGAGCGGT TATATCCGAG ATGCGGAGTG TAACAAGAGC AAATATCCGT ATTCTTCAAA AAGAAGATGT ACCAAAAATT GCACGTGAAG ATGAAGAGAT GGTTCAGATT ACAGGAAATC CTGATGCCGC TATGAAAGCT CTTACGCAAG TAATCTTGCG ATTAAGAGCT AACTCTTTCG ACATGGATCA TGGACTTGTC TTGCTACCAA CATCTTTTCC ATATATCCCT CAACTGACCG AAAGTTCGAG CAAATCCAAA TACGCAAAAC GCGATGATCA CAGCAAACTG AATTCGAATT CTAAGAGAAG AAACTATGTT TCTTAAATCA AGAAAACCAA TCTTAGAGAG GAAGATTGAG AGTGTTCAGA ACTTCAATGT TGATGCAATT TTTATACAAA ATGATGTTAC TTATAG 
Length1706
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5696188.. 5698720
Download Sequence
A.thaliana
AGI-codeAT1G14170.3
DescriptionRNA-binding KH domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg495546 formin homology5
14.5258 Ahg931560 lysm domain GPI-anchored protein 2 precursor
31.6544 Ahg321761 WRKY DNA-binding protein 54
38.8844 Ahg486080 WRKY DNA-binding protein 70
40.398 Ahg923528 Transmembrane proteins 14C
46.7974 Ahg490334 Protein of unknown function, DUF538
49.7494 Ahg490855 calcium ATPase 2
53.7401 Ahg486497 ELMO/CED-12 family protein
59.5735 Ahg949044 Nucleotide-sugar transporter family protein
64.467 Ahg479191 ubiquitin protein ligase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression