Detail



ID : Ahg471894

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471894|fgenesh2_kg.1__1848__AT1G16920.1
Sequence
AAATCTCAGT TTACACCTTT ACACTGCTGC GTCTCTCTCT CTCTCTCTCT TTCTATTTCT CAGATTAATC GCTGAGAAGA AGCAACCACC TGAGACGGCG GAGATGGCTG GGTACAGAGT GGAAGATGAC TACGATTACC TCTTCAAAGT TGTTCTTATA GGCGATTCTG GAGTCGGCAA ATCCAATCTC CTTTCCAGAT TCACCAAAAA CGAGTTCAAC CTCGAGTCTA AATCCACCAT TGGCGTCGAA TTCGCCACTC GCACATTAAA AGTCGATGGT AAAGTCATCA AAGCTCAGAT TTGGGACACT GCTGGTCAGG AGAGGTACCG TGCCATCACC AGTGCATACT ATCGTGGAGC TGTGGGCGCA CTCCTAGTAT ATGATGTAAC CCGCCGTGCA ACATTTGAGA ACGTAGACCG GTGGTTAAAG GAGCTCAAGA ACCACACAGA TCCAAACATT GTAGTGATGC TCGTTGGTAA CAAATCTGAT CTCCGCCACT TACTAGCTGT TCCTACAGAA GATGGAAAAT CCTACGCTGA GCAAGAATCA CTCTGCTTCA TGGAAACATC TGCCCTTGAA GCTACCAATG TCGAGGACGC ATTTGCAGAG GTTTTGACAC AGATTTATCG CATCACAAGC AAGAAGCAAG TTGAAGCTGG TGAAGATGGG AATGCCTCTG TCCCGAAAGG TGAGAAAATC GAAGTTAAAA ACGATGTCTC TGCTCTGAAG AAACTCGGGT GCTGCTCAAA TTGAAGGCTT TTTTTTTTTT 
Length770
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6747013.. 6748960
Download Sequence
A.thaliana
AGI-codeAT1G16920.1
DescriptionRAB GTPase homolog A1B
TAIR curator summarysmall GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.
Alias[ATRABA1B][BEX5][RAB11][RABA1b][RAB GTPase homolog A1B][BFA-visualized exocytic trafficking defective 5]
Gene coexpression
MR
MR Locus Description
21.8174 Ahg472662 MLP-like protein 423
25.807 Ahg482640 ribosomal protein L24
36.6606 Ahg496177 GTP binding Elongation factor Tu family protein
37.8946 Ahg485778 Uncharacterised protein family (UPF0497)
38.8844 Ahg923746 Zinc-binding ribosomal protein family protein
39.8121 Ahg923403 poly(A) binding protein 8
40.5463 Ahg478235 Ribosomal protein L10 family protein
43.7493 Ahg474002 receptor for activated C kinase 1B
53.1695 Ahg479286 conserved peptide upstream open reading frame 30
56.6039 Ahg493389 Ribosomal L27e protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression