Detail



ID : Ahg471953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471953|fgenesh2_kg.1__1907__AT1G17460.1
Sequence
CAAAACAAAA AAAATTAAAG CAGAACAAAA AAGTTTCTAA ATTTCCAAGC TTTTTGCTTA GTCAAGAAGC CTCTCCTCCG AGAACTCTCG CCGATGAAAC AACGAGCTCA CTGGAAAGTC TAAAACTTTT GGCTTCCCCG TTCGCGTTCT ACTTTCTCTG TTGCATTTGG TAGGTTAGAC TTCAGGAGCA ATGTTTGGAA ATGTGGAAGG CTATGGAGAT ATGTTTCAAG ACAGTATTTT TCAGACAAGA AGCGGTTCAC TTTCTTCAAC AAATCAAATT GGAAACCGTG TTGCGTACAA GCTTGTGCGG GTTGCAGGAG ATGGGACTCT AGTTCCTGCA ACTGATGAAG AAATGTTGAA GGTCAAGGAT TTGCTTGAGA ACAACGAGCC TGATATGCCT GTTTTACCAG AGCCTATACA AACTGAGAAG TACATTCCCG ATGAAGGTTC ACCTTCTCAG TTTCTGCAGC TAGAAAACTT TGAAGGCTTA TTTCAGTCGG AAACTGCAGA AGCATATACA GAAAATATGA ATTCTCAACA TGAGTCTAAA GAGGAATTGA TGTATGGAAC TCAGATGCTT TTTGCTCTTC CGGATACCAA ATTTCAAATT TCTAATGAGC TGCCTGGGAA TGTGGAGCAA GTCCAATCCG AAGTTTTGCT GCCGGAACCA ATTCTTTTTT CATCAAATCG ATGCAGTATG AATCAATCTA CGGATGACTT ATATGCTACG GGTAGTCCTA AAGAACCTAA AGAAGCTGCA TTGTCAACTG CTGCCCCGAA ACCTGAAGTT TCTAGAGTAG CAGGCGAGAT ATGCTTGGAT AATCTTTCAA TTAGAGCATT ACAAGAAACA TCCAGGGCCA CGTTTGGTCG CGAAACTACT TGCAAGGACA ATCGATGGCT CAAAAGGAGA ATCACAATGG GACTGATTAA TTCATGTGTA GTTCCAACAA CTAACCTGAC AATTAATGAT AACAAACTGA TTGGTGGAGA TCAAGATGCA ATTGATGCTT TTAGCAAGGA TACATTAGAT GAAGAAAGAG CTATTGAAAG CAAAGATACA CCATCTAGTC CTGACTGCAT AAAGGGGCAT TTAGATGATT TTGGGCATAC TTCTGTTGAA ACTTTTGTGG ACTATTATTC TGGAAACGAA GATTTTGATG GTGAACATAG GTCTGCAAAG AGAGTTAGGA AGCCTACAAG GAGATATATT GTAGAAACTT CAGAAACCGG TGAAAGACAA CAAAGTGACG AGTCAATGAT CCCATCAAAA GATCAGAGCT CTATTCAAGC CGTTTCTTCA GGAGGGGGAG TTGTTGTCAC CAGGATGGTA TCCCTAGCTG GTTCAAGAAT TCAGGTTCCC TATGTTTCTC ATGTAAGAAG AAGCCGTCCA AGAGAAAACA TAATGGCTCT CGGGGAATTT CATTCCAAGT CATGGGAGGT GAAAGCTACT CCAGACAAGG GTAACCTGAA TCTAAGCCCA TCTCAGTTGA ACAATGATGT GAACCGAGTT CCAGGTGTCA AATCTGCGCC TAGACTCGTC CAGAAAGAAG TAAGCGACAA GGACCATTTA AAACCAATTT TCACTGATGT GGATCAAGAC ATGATGGAGC CAGAGCTCTT AGACTCATCT GGAGATAGCT CAGATGATAA TTGCGTTGAT GTACCAATCA CGCAAAGTGC AATTAGAAGG AAGCTTCATC GAGCTTGGAA TGTCTCTGAA GTTGAAAAAC TAGTCGAAGG TGTGTCCAAA TATGGAGTAG GGAAATGGTC TGAGATCAAA AGGCTTTCAT TCTCACCATA CACACATCGT ACCTCTGTGG ATCTCAAGGA CAAATGGCGA AATTTACAAA AAGCAAGTTC TTCAAACAGA ATGGGAGGAG GTCTGAAGAA ACACGGATCG ATGGCTATTC CTAGTCACAT TATGTTGCAG GTAAGAGAGC TTGCTCAGAA ACAATCACCA ATTTCACCTG TAGAAAGCAA GGCTAGAGTG GTGAAGAGAT CAAGATCAAG AAACGGTTTC TTGTAGCGTT TATTTTTCTC GTATAAATTT TTTGTAGTTT TTGATTTAAA CAGAATCACT AA 
Length2082
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6984635.. 6988365
Download Sequence
A.thaliana
AGI-codeAT1G17460.2
DescriptionTRF-like 3
TAIR curator summaryArabidopsis thaliana myb family transcription factor (At1g17460)
Alias[TRFL3][TRF-like 3]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg930083 DOF zinc finger protein 2
26.8701 Ahg489790 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
31.3209 Ahg492573 non-yellowing 1
39.6485 Ahg914657 Lipase/lipooxygenase, PLAT/LH2 family protein
42.6615 Ahg938262 Leucine-rich repeat protein kinase family protein
46.0977 Ahg488185
47.9166 Ahg493967 nodulin MtN21 /EamA-like transporter family protein
50.6656 Ahg925271 F-box family protein
52.0769 Ahg934962 Galactose oxidase/kelch repeat superfamily protein
55.2087 Ahg927252 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression