Detail



ID : Ahg492573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492573|fgenesh2_kg.7__2006__AT4G22920.1
Sequence
GCCGAATCTG TGTCATTTTG TCGCAACGAG ATGGCTAAGT TATCCAAAAG ACGGTTAGAG CCGGTTGTTA GCCCCACCAT GACGACACAT GGGGAAGCTC ATGCAAAGAT TAAGAAGAAC ACGTGGCACT CTCTCGTGTT CAGAAAATTT CCAAAAGAGC GTTCAGATTT GGGCACAGAA GTGTGAAACG TGAAGCAACG AATCACTTTT AAACACAAGA ACCAACCTTA TACGCATCAC AAAAGAACCC TAAATTCCAG GAAGATTGAA AAACCAAATC TTCAAGCAAA GGAAAAAAAA CTCAAAATTT GGGTCTTTTA TTTCTTAAAA AGTTACAAGC TTTTGATTGT GGTTTCAGTG TACGAACACG CAAGAAATCG CGTGAAAAAA TTGTATCCAA GCTTCGGAGA AGATCTCTCT GTATTTAGTG GTGCTTTGTT TCTGTTCTAA TTTCTGAAAA ATTGAAGCTT TTGATTTGGT TTCAAGAGAG CAGAGAGATG TGTAGTTTGT CGGCGAATCT GTTGTTACCA ACGAAGCTGA AACCAGCTTA TTCAGACAAA CGGAGTAACA GTAGCAGCAG CTCACTCTTC TTCACCAACA GAAGATCCAA GAAGAAGAAT CAATCGATTG TTCCCGTTGC AAGATTGTTT GGACCCGCGA TTTTCGAATC ATCCAAATTG AAAGTATTGT TTTTAGGGGT TGATGAGAAG AAGCATCCTT CAACGCTCCC TAGAACTTAC ACTCTCACTC ACAGTGACAT TACAGCTAAA TTAACTTTAG CTATTTCTCA CTCCATAAAC AATTCTCAGT TGCAAGGATG GGCAAATAGG CTATACCGGG ATGAAGTTGT GGCAGAATGG AAGAAAGTGA AAGGGAAAAT GTCGCTTCAC GTTCATTGTC ACATAAGCGG TGGCCATTTC CTTTTAGATC TCTTTGCAAA GTTTCGATAC TTCATCTTTT GCAAAGAACT ACCAGTGGTG TTGAAGGCTT TTGTGCATGG AGATGGGAAC TTGTTGAACA ATTACCCTGA GTTACAAGAA GCTCTTGTTT GGGTTTACTT CCATTCTAAT GTCAACGAGT TCAACAAAGT CGAATGTTGG GGTCCGCTTT GGGAAGCTGT TTCGCCTGAT GGTCACAAGA CTGGGACTCT TCCCGATGCT CGGTGCGCGG AAGAGTGTAG TTGTTGTTTT CCAACCGTTA GCTCGATTCC ATGGTCTCAT AGTCTTAGTA ATGAAGGTGT AAATGGTTAC TCTGGGACTC AGACTGAAGG AATTGCTACT CCTAATCCGG AGAAACTCTA GTGATTAAAC ATCAAACTAC AAGTTTTTCT TTTGGTTTCT GGTAGTTTGT ATAAAAGTGA AAAGGAAATG GCAGGTCTTT CCTTTTGGTG GATCTAAATA TTGGTTTGGT GTACATAATG TGGTATAGGA AAATAATGAT TATCTGTAGG TTAAATACAT TTGTGTCTAC TCTTTAAGTC TTGACTAATC ATAGTAGTAT TATAGTATTT CATCCACAAG ATCAAAATGT 
Length1530
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7838894.. 7840889
Download Sequence
A.thaliana
AGI-codeAT4G22920.1
Descriptionnon-yellowing 1
TAIR curator summarySimilar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves.
Alias[ATNYE1][NYE1][SGR][NON-YELLOWING 1][STAY-GREEN]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg482040 Plant protein of unknown function (DUF828)
14.7648 Ahg920054 Flavin-binding monooxygenase family protein
16.5227 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
19.2873 Ahg948739
21.9089 Ahg488679
25.8844 Ahg889976 Ubiquitin-like superfamily protein
27.5681 Ahg485163
27.8388 Ahg322779 Protein of unknown function (DUF707)
31.3209 Ahg471953 TRF-like 3
34.2053 Ahg494441 solute:sodium symporters;urea transmembrane transporters
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression