Detail



ID : Ahg472021

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472021|fgenesh2_kg.1__1975__AT1G18040.1
Sequence
GCGTCTGCAA ACGCGCCAAC GGCTACTTTT TCTCCGGAGC CGGAGCTCCC AACGCTGAAA CCCTAAAAAA ATCTCCCGGT ATCTTCCTCA TCGTCGATTT TACCCAATTT CGGAAAGCAA TCGAATTCTA GTGAGGGAAC CAAAGTGAAG TAAGAAGAAA GAGAGAAAAC CCGAAAATGC CGGAGATGGA GCAGCCAAAG AAAGTTGCTG ATAGGTATCT CAAGCAAGAG GTTCTTGGTC AAGGTACCTA TGGAGTCGTC TTCAAGGCCA CTGATACTAA GACGGAACAA ACTGTAGCAA TCAAGAAGAT AAGGCTTGGT AAACAAAGGG AAGGTGTAAA TATTACAGCT CTCAGGGAAA TCAAAATGCT CAAAGAGCTT AAGCATCCTC ATATAATTCT GCTCATTGAT GCATTTCCTC ACAAGGAAAA CTTGCATCTT GTCTTTGAGT TCATGGAGAC TGACCTCGAA GCTGTCATTC GCGATTCCAA CATATTCCTC TCACCCGCCG ACATCAAATC TTACCTCCTA ATGACATTTA AAGGACTTGC TTATTGCCAC GATAAATGGG TTTTGCACAG GGATATGAAG CCAAATAACT TGTTAATAGG AGTTGATGGA CAGCTGAAGC TTGCAGATTT TGGCTTAGCA CGTATATTTG GTAGTCCTAA TCGTAAATTT ACCCACCAGG TGTTTGCTAG ATGGTACAGA GCACCAGAAC TTTTGTTTGG TGCAAAACAA TATGGTGCTG CAGTTGATGT GTGGGCCGTT GGCTGCATAT TCGCCGAACT TCTACTGCGC AGACCATTTC TTCAGGGAAA CAGTGATATT GATCAATTAA GCAAAATATT TGCTGCTTTT GGGACACCAA AAGCAGATCA GTGGCCGGAT GTAACAAAGC TTCCAGATTA TGTAGAGTAT CAATTTGTCG CGGCACCGTC TCTACGTTCT TTATTCCCAG CAGTTAGTGA AGATGCTCTC GACTTGTTGT CCAAAATGTT TACCTATGAC CCAAAGGCCA GAATTTCCAT AAAGCAGGCT CTAGAACACA GATACTTCAC TTCTGCACCT GCTCCTACTG ACCCGGCTAA GCTCCCAAAG CCCGTTCATA AGCAGGATGG TAAATCCTCT TACGGTAAAC ATGAAGCCAT TACAGTGCTA TCACCACCAC GTAAGTTTAG AAGAGTGATG CCTGAGCGTG GGAGGGTTGA TAGTTTAAAG GCTCATGTTG ACAAGGATCA ACAAGCACCC ATGTCATTAG ATTTTACCAT CCTCGCTGAG CGACCTCCAA ACCGGCCAAC AATCACCAGT GCTGATAGAT CTCATCTGAA GAGGAAACTC GATCTTGAGT TCCAATAAGA CTGTTTGTTT TGCACTCTTG CCTCTTCTCT TACCTTCTCC ATTTTCATGT TCTGGTGAGA CCAAAACATT CTTAAGTTGT CAATTTACTG CTGCTTGTGT AAGCTGGCGA TTTATTCTTT TTCATTTTTA GCTTAATTAC AAACCAGAGG GATCCTAAAT TCACAATGCT AATATTTCGT TGTCCCATAG GCTTTATTTA TTGTAAACTG ATCATACTGT ACTACGAAGT CTATGATTAT AAAGCTTTCT ACTTTT 
Length1616
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7218817.. 7221467
Download Sequence
A.thaliana
AGI-codeAT1G18040.1
Descriptioncyclin-dependent kinase D1;3
TAIR curator summary
Alias[AT;CDCKD;3][CAK2AT][CDKD1;3][CYCLIN-DEPENDENT KINASE D1;3][cyclin-dependent kinase D1;3]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg492627 SWIB complex BAF60b domain-containing protein
14.4222 Ahg925447 RNA polymerase subunit alpha
17.4929 Ahg470771 Transcription factor IIA, alpha/beta subunit
19.6723 Ahg483041 Ribosomal protein L10 family protein
20.1494 Ahg484805 Spc97 / Spc98 family of spindle pole body (SBP) component
22.2486 Ahg942385
29.5296 Ahg494214 RING/U-box superfamily protein
34.4674 Ahg335256 ATP binding microtubule motor family protein
34.8568 Ahg487063 hydroxyproline-rich glycoprotein family protein
37.55 Ahg944081 Ribonuclease III family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression