Detail



ID : Ahg487063

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487063|fgenesh2_kg.6__197__AT5G02850.1
Sequence
TCTCTTAAAT TACCTTGGAT TTAAGAGATT CCTTCGCCGT CGGCGAAGAT GCTACAGCAT CAGATCGTAC AATCTCCGGC GAGATTAGGG CTAACAGGTC CTGGTTCTCC CTCCGTACAA AATCCAACGC CTACTCGTCA TGGCCATCCA ACCTCTTCTT CATCTTCCCA ATCTCAGCAC CAACAGATCC AACAACAACC TAATCTACTC CCTTCCTCCA CCGTCGCCGC CGCTTCCTCA GCCTCAGCTG CATCGGCTAT TTCATCCTCC GCTTTGCTAT CTCTCCTTCC GCCATTACCG CGAGCTCAAG CTCTTCTCCA GCAGATGGCG GTTTTGACGT CTAAGCTCTT CGACGTCTCT CCCAATCGAG CTCTCTGGCT CTCAGCTTTT CGTGGCTCTC TCCCTTCGTT CCTCTCCTCA CACTCGTTAC CACCGCCTCC GCCGCTTGAA AACCCTAATC CTTCATCCAC GAAGGAGATC CTCTCTCAAT TCAATTCCCT CCAGACTCAG CTCTTCGAAG CCGTAACTGA GCTTCAAGAG ATCCTCGATC TGCAAGACGC GAAGCAAAAG GTCGCGCGTG AGATCAAATC CAGAGATTCA TCTCTTCTCG CGTTCGCTAA CAAACTCAAG GATGCAGAAC GTGTTCTCGA TATGCTTGTT GACGACTACT CCGACTATCG CAAACCAAAA CGAAGCAAAA TTGTGAGTGA AGAAGAAGAA GACAATGATA ATGAGTCTTC TTCTTCTTCG ACCACAGTTT CGTCTCAGCT CAAACTAAAG GACATTTTAG CTTACGCTCA TAAGATCAGC TACACCACAT TTGCTCCACC GGAATTTGGT GCAGGGCAAG CACCTCTCCG TGGTGCATTA CCACCAGCTC CACAAGACGA ACAAATGAGA GCTTCTCAGC TCTATGCTTT CGCTGATCTT GATATCGGTC TGCCGAAAAC AGTAGAAAAC ATGGAGAAGA AGGTTGAAGC ACTCATTGAG CCACCACCAC CACCACCAGA AGCTATGGAT ATCTCTGCAA TTCATAACCT GCTTCCGCCG AATATCGCAG TTCCTTCAGG ATGGAAACCA GGAATGCCGG TCGAATTACC AAGAGATTTA CCATTGCCAC CTCCTGGATG GAAACCAGGT GACCCAGTTG TGTTACCGCC ATTGGAGTCA ATTGCTGCAC CTAGAGCGGA GGATCAGCAA CATATGCGAC CTCCTCAGGG ACTTCACAGA CCGCCTGATG TCATACAGGT CCGAGCTGTT CAACTTGACA TTTTGGAGGA TGATGATAGC AGTGATTACA GCAGCGATGA TGCAAGCTCA GATGACGAGG ATTAATCAAC ATTGTAATTG ATGTTGACCA ATGTTACTGC TAATTCTTGA TCAAGTTTGA GTGAAATTTT CTACTTGGTT TCGTTTTGTT TTAGCAGTGT CTTTATGTGG ATAGATGTTA AGTAGTATAT GCTTCATCGT TATCAGTATC TTTGATGTAT CAAGATTGTT TCTTACGAAA CCCTGGATTC TAATTCAGTT TACAGAGTTA TTGGTCATCT TTTTTC 
Length1556
Protein Sequence
Protein Residue
Map Locationscaffold_6: 746953.. 748521
Download Sequence
A.thaliana
AGI-codeAT5G02850.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.60233 Ahg478335 TBP-associated factor 12
12.2474 Ahg480759 RNA-binding (RRM/RBD/RNP motifs) family protein
18.1659 Ahg496603 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
21.4942 Ahg933211 copper/zinc superoxide dismutase 2
22.1359 Ahg315354 Nucleoporin autopeptidase
24.1454 Ahg322778 GDSL-like Lipase/Acylhydrolase superfamily protein
27.9464 Ahg494214 RING/U-box superfamily protein
29.8998 Ahg485094
30.5287 Ahg942308 Ribosomal L18p/L5e family protein
31.749 Ahg474512
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression