Detail



ID : Ahg472022

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472022|fgenesh2_kg.1__1976__AT1G18070.1
Sequence
CAAAAATTAG AGCCTCATAG AAGCGGCACT AGTTCGTTTG GTGGATCCCT TAACGCGCTT CTTCTTCTTC TTTCTCTTTC GCGAGATAAC CTAGAAAACC TTTTCATTTC GTTCTCTTCT ACAATCCGCC ATGGATCTTG AGGCTGAGAT CCGCGCATTA CAGCTTGATT CGGCAGATGA AAACAATGGT GTTGTCATTC CAGAAGATCA TAACTCAGAT GAAGTTGAGA ATTTGGATAA AGCACCAGAA GAAGACTTGA AAGATGAAGT GCAAGAATCA GTCCCAGTTC CTGATGAGCA ACAAGCTTCT GAGGATCATG ATGAAGTAAT GCTTCATCCA GTCCATAACC CAGCGAAAGC TAAAGAGAAA GCTGCTCAAG ACAAGGCTGC CAAAGAGGAA GCTGAAGATG AAGCAGAAGC AAATAAAAAG AGACACTTGA ATGTGGTGTT CATTGGGCAT GTTGATGCTG GTAAATCCAC AATTGGAGGA CAGATTCTTT ATCTTAGCGG TCAGGTGGAT GAACGACAAA TCCAAAAGTA TGAGAAGGAA GCAAAAGATA AAAGTAGAGA AAGCTGGTAT ATGGCATATA TAATGGATAC AAATGAAGAA GAGAGGCTCA AGGGTAAAAC AGTTGAAGTT GGAAGGGCAC ACTTTGAAAC TCAGAGCACT AGATTCACCA TTTTGGATGC TCCGGGGCAC AAGAGTTACG TACCCAATAT GATTAGTGGA GCATCTCAAG CTGACATCGG TGTGCTGGTG ATTTCAGCTC GAAAAGGTGA ATTTGAAACG GGATATGAGA GGGGTGGGCA GACACGTGAA CATGTTCAAC TTGCCAAAAC ATTGGGTGTT TCAAAGCTGA TTGTTGTTGT GAACAAGATG GATGACCCAA CTGTGAACTG GTCGAAAGAA AGGTACGATG AAATTGAACA AAAAATGGTA CCGTTTTTGA AGGCCTCTGG CTACAACACA AAGAAAGATG TTGTCTTCTT GCCTATATCT GGTCTAATGG GCAAAAATAT GGACCAGAGG ATGGGTCAAA ATGTTTGTCC TTGGTGGAGT GGCCCTAGCT TTTTTGAAGT CCTTGATTCT ATTGAAATTC CGCCACGGGA TCCTAATGGT CCATTCAGGA TGCCTATTAT CGATAAGTTC AAGGACATGG GAACTGTTGT TATGGGAAAA GTAGAATCTG GCAGCATTAG GGAGGGTGAT TCCTTGGTTG TTATGCCGAA CAAGGAACAT GTGAAAGTTG TTGCTATATA TTGCGATGAG GATAAAGTTA AGCGTGCAGG ACCGGGTGAG AATTTGAGAG TTCGTATTAC TGGCATTGAA GATGAGGACA TCCTTGCTGG TTTTGTTTTA TCCAGCATTG TTAACCCTGT CCCTGTTGTT ACTGAGTTTG TTGCCCAACT ACAAATCCTT GAGCTTCTTG ACAACGCTAT TTTTACAGCT GGTTACAAGG CAATTCTCCA CATCCATGCG GTTGTCGAGG AGTGTGAGAT TATTGAATTG AAAAGCCAAA TTGATCTCAA AACAAGGAAA CCAATGAAAA AGAAAGTTTT GTTTGTGAAG AATGGTGCTG CTGTTGTGTG CCGCATCCAG GTTACGAATT CAATTTGTAT TGAAAAATTC TCGGATTTCC CTCAACTTGG AAGATTCACT CTACGAACGG AAGGAAAAAC AATTGCGGTT GGAAAGGTTA CTGAGCTCTT AAGTGCTGCC TCAAGCGCTT GATCCAAATT TTGCGAGAGA AAAGGAGACG GCTTTCGGGT TGCACCAAGA GGGAGATTAT TAGGAAAACG CTTCATGAAG GATGATTCGG ACTAAGAAAT CTGAGTTCCC TAAAACCCAA GTTCTAATAC CCTTTTTTTT CAGTGCACAG TTGAGGTTTG AGATTTACAA GCTGCGGAGA GGTGTAACCT GAGACCGGTT TTCAGAGAGA ATTATGATGA AATTGAGTGA GAGTTTTCTT TTCTTTCAAG TTAAATTTAC AATTAATACG ACTACCTCCC TTTTGGCTGA CTGAATCTGT TTTTCGGCTA TTTGGAGATT GCTATTTCAT AGTTGAGGAA CACACATTAT TCGTTCCTTA ATACTTTGTC AGACAAGTAG CGGTTTCTAG CACATTCT 
Length2128
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7227709.. 7232678
Download Sequence
A.thaliana
AGI-codeAT1G18070.3
DescriptionTranslation elongation factor EF1A/initiation factor IF2gamma family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg487662 Succinyl-CoA ligase, alpha subunit
5.47723 Ahg481452 KH domain-containing protein
7.07107 Ahg917411 autoinhibited Ca2+ -ATPase, isoform 8
17.1464 Ahg470757 CCCH-type zinc fingerfamily protein with RNA-binding domain
23.4094 Ahg944608 eukaryotic translation initiation factor 3K
26.9815 Ahg932069 Coatomer, alpha subunit
29.5466 Ahg494127 general regulatory factor 3
30 Ahg930770 Nucleic acid-binding, OB-fold-like protein
30.1993 Ahg475376 Ribosomal protein S5 family protein
32.9848 Ahg472840 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression