Detail



ID : Ahg487662

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487662|fgenesh2_kg.6__796__AT5G08300.1
Sequence
AAAAGTGTAG CCTTAAGAGG AAGCCTCTTT TGTCGGCTTT TGATCTCAGC TGATTCCTCA AAACTAAGCT CCGCTGAATT TTCTTTGTTC CATTTCCGTC TTCACCCAGT TTAGGGTTCA CAAGTTGATT CGGATCGAGA ACACCGAGAA GAAGAAGCCA GTCAATCATG TCTAGGCAAG TCGCAAGGCT TATCGGATCT CTGTCATCAA AAGCTCGCCG TTGTTCTACC GGCGGCTCGG AGGTTTTTCC GTCATGCCAG TCTCTCACTT CGTTGACCCA ATCTCGCTCC TTCGCGTCGG ATCCTCATCC TCCTGCGGCT GTTTTCGTTG ACAAAAACAC ACGAGTCATG TGTCAAGGTA TCACCGGAAA GAACGGCACT TTCCACACTG AACAAGCCAT TGAGTACGGC ACCAAAATGG TGGCAGGAGT GACACCGAAG AAGGGTGGAA CAGAACACTT AGGTCTCCCT GTTTTCAACT CTGTTGCTGA AGCTAAGGCT GACACCAAAG CCAATGCCTC TGTGATTTAT GTTCCTGCAC CTTTTGCTGC TGCTGCTATT ATGGAGGGTA TTGAGGCTGA GTTAGATCTT ATTGTGTGTA TTACCGAAGG AATCCCTCAA CATGACATGG TACGTGTTAA GCATGCTCTT AACGGTCAAT CCAAAACTAG GCTGATTGGT CCAAACTGCC CTGGGATTAT CAAGCCTGGT GAATGCAAGA TTGGAATTAT GCCGGGATAC ATCCACAAGC CTGGGAAGAT CGGAATTGTC TCGCGATCTG GAACCTTGAC ATATGAAGCT GTTTTCCAAA CAACTGCAGT GGGTCTAGGC CAATCTACTT GTGTAGGAAT TGGTGGGGAT CCTTTTAACG GGACAAACTT TGTTGACTGC TTGGAGAAAT TCTTTGTTGA TCCTCAAACA GAAGGTATCG TTCTCATAGG AGAAATCGGA GGCACTGCAG AAGAAGATGC TGCAGCATTG ATAAAGGCAA GTGGTACTGA GAAGCCTGTT GTTGCTTTTA TTGCCGGACT TACTGCACCA CCAGGTCGTC GAATGGGTCA TGCAGGAGCC ATTGTTTCTG GTGGTAAAGG TACGGCTCAG GACAAAATTA AGAGTTTGAA TGATGCCGGG GTGAAGGTTG TTGAATCTCC GGCTAAGATT GGAGCAGCGA TGTATGAGCT CTTTCAAGAA AGAGGTCTTT TGAAGCAGTG AAGTGAATTT CACGAGCTTT TTCGCTTCTT TTTTTCCATC TTGAAACCTT CAAGAAAAAA AGAAAAAAAA AACCCTAATT CCACGCCATT GATGGCTGCA CACTCTTTTG GGGTTTGTTT TGCTAAATTG ATATGATTTT TCCAATTGAA GAGTGATAAT TCAAAGAGAT TCAAATCTTA TTGCATTGGA TCATTTTTAA TGATATCTTC CAGTGCAAGA AATATGAGGG AAGCAATGTT TCTTTA 
Length1456
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3118788.. 3121469
Download Sequence
A.thaliana
AGI-codeAT5G08300.1
DescriptionSuccinyl-CoA ligase, alpha subunit
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg923241 Signal recognition particle, SRP54 subunit protein
2.82843 Ahg923242 Signal recognition particle, SRP54 subunit protein
2.82843 Ahg944914
4 Ahg472022 Translation elongation factor EF1A/initiation factor IF2gamma family protein
5.19615 Ahg480870 ATP citrate lyase (ACL) family protein
5.47723 Ahg934690 SAC3/GANP/Nin1/mts3/eIF-3 p25 family
5.91608 Ahg474517 20S proteasome alpha subunit E1
9.64365 Ahg478716 proteasome activating protein 200
10.0995 Ahg924165 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
12 Ahg951652 GTP binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression