Detail



ID : Ahg470757

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470757|fgenesh2_kg.1__711__AT1G07360.1
Sequence
AAAATCCCGT CGGCTCCTTG GTGTTCGAGA TTTGATATCG AATAATCGAA TCAGAGGATA AGAGAATGGC TCACAGAATA CTGAGAGATC ATGAAGCTGA TGGATGGGAA CGCTCTGATT TCCCAATCAT CTGCGAATCT TGTCTCGGTG ACAACCCCTA CGTGCGAATG ACTAAAGCGA ATTATGATAA GGAATGCAAG ATTTGTACAC GACCTTTCAC GGTGTTTAGG TGGCGACCTG GCCGCGATGC TAGATACAAG AAAACCGAAA TTTGTCAGAC TTGTTGCAAG CTCAAAAATG TATGTCAAGT CTGTCTTCTG GATCTTGAGT ATGGTCTTCC AGTTCAAGTC AGAGACACAG CCCTCAACAT TAGTACTCAT GACTCTATCC CTAAAAGTGA TGTCAACAGA GAGTATTTTG CTGAAGAGCA CGACAGAAAG ACTAGAGCTG GACTGGATTA TGAATCTTCA TTCGGGAAGA TGCGACCTAA TGATACTATT TTAAAGCTTC AAAGAACAAC ACCATACTAT AAGAGGAACC GAGCACATGT TTGTAGTTTC TTCATCAGGG GTGAGTGTAC AAGAGGTGCC GAATGTCCAT ACCGGCATGA GATGCCCGAA ACAGGAGAGC TATCCCAGCA AAACATTAAA GACCGTTATT ATGGTGTTAA TGATCCAGTT GCTATGAAGT TGCTCGGCAA AGCTGGTGAG ATGGGCACTT TGGAATCACC AGATGATGAA AGCATTAAAA CGCTTTACGT CGGTGGACTT AACTCGAGAA TCCTCGAGCA GGACATAAGA GACCAGTTCT ATGCTTATGG AGAAATCGAA TCCATCAGAA TCTTGGCTGA TAAAGCTTGT GCGTTTGTCA CATACACAAG CCGAGAAGGA GCAGAGAAGG CCGCACTAGA GCTCGCCAAC AGGCTAGTTG TCAATGGTCA GAGGCTAAAG CTCACATGGG GAAGACCCAA ACCTGATCAA GATGGTTCAA ACCAACAAGG TGGTGTGGCT CATAGTGGTT TACTACCTCG AGCCGTTATA TCTCAGCAGC ATAATCAACC CCCAGCAATG CAACAGTACT ACATGCACCC ACTACCAGCT AACCAAGACA AACCTTATTA CCCATCAATG GACCCACAGA GAATGGGTGC AGTCATTTCA ACCCAAGAGG CTGGTGGTTC AAGCACTGAG AACAACGGAG CTTCATCTTC TTCTTACATG GTGCCTCCAC ATCAGCCATA CCCACCACCA CCATATGGAT ATATGCCATC GCCTTACCAG CAGCAGTATC CTCCTAACCA TCATCATCAT CCTGGTCCTA TGCAGCACTA TGCCCCGCCC CCAGCAGCTT ACCCGTACCC ACAGCAAGCT GGTCCTGGAT CAAGGCCTGC ACCGTCTCCA AGCGCGGTCT CTGCTCCATC ACCCGACTCT GCACCTACTG GGTCTGGAGC ACCTTCAGGA TCCTCTCAAG AACCTCCTGC TGTTTCTACT ACTACTGGTT CGTCTCAGTA GAGAACAATT CTCGCTTAAA ATGTACTGCA AGTTTCCCGA TATTCA 
Length1556
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2528002.. 2530313
Download Sequence
A.thaliana
AGI-codeAT1G07360.1
DescriptionCCCH-type zinc fingerfamily protein with RNA-binding domain
TAIR curator summary
Alias[MAC5A][MOS4-associated complex subunit 5A]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg929571 lipoamide dehydrogenase 2
4.24264 Ahg492815 small nuclear ribonucleoprotein associated protein B
11.8322 Ahg934119 transcription activators
13.0384 Ahg482209 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
13.4164 Ahg497397 high chlorophyll fluorescence 153
14.1421 Ahg918979 splicing factor Prp18 family protein
14.7309 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
16.1245 Ahg474895 regulatory particle non-ATPase 12A
17.1464 Ahg472022 Translation elongation factor EF1A/initiation factor IF2gamma family protein
18.7617 Ahg478805 Kinase-related protein of unknown function (DUF1296)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression