| Annotation |
|---|
| Description | jgi|Araly1|323761|fgenesh1_pm.C_scaffold_5001305 |
| Sequence |
ATGGGAGATG AAACTTTTGA TGGTATCGAA GCCAAGTACA TTTCTGGTCT CAGTACCATA ATGGTTGCTA CAATTCAAGA AGCCAAGGAT CGAATTTCTC AGATCGAGTA TATTTTTTGT AGCCAGTTAT TCCCAAATTT TCAATCCAAA TTTAAAGCTT TTGAAAAAGT TAATTCAGAG GCTCGTCTTG CTGCTTGTGA TGCTTGGAAA GAGAGAGAGA AAAATTTGGT ATCTCAGATT GAGGAGCTTA AGTTAGAGAA TCAACAGATT AAGTCTGAGA ATGTGGAATT GATCAAGAAT AAGGAGAAGC TAGCTGAACA ACTTGATAGA ACTGCTTCTA TGCCTCTTAG ACTGACGAGT CTACAAGACT ACATTGCTCA TTTGAAAAAG AAGCTCAAGA GTAGATCTAA GATGGTTAGT GATGCAAGAG AGTTGTATTA TAGGTTAGTT CAGTTGTTAC AGGTTAAGGG TTCGGATGAG CTTAGCGAAG ATGGGATTAA TATGATTCTT TCGGAAGTGA AGAGCCTTAA GGTGAAGCCT GAATTTCTTC AGGAGGAACT TTCAAAGAAG ACATTGGTAA CGGAGAATCT GCTGAAGAAA CTGGAGTATT TGTCTACAGA AGCTGCGGAT GGTGAAAGGA AGTTGAGCAG CGTTGAAGAA GAGAAACAAA AATTGAAGAC TAGGTTGCAG GTTTTTGAGG AGAATGTCGG TAGACTTGAA GAGATGCTCA GGCAGAAGAA CGATGAGCTT GAGGAAGGAC AGACGGCTCT TGAGGTTTTG CAGGGTAAAC TCAACTTGAC AGAGAGGGAA ATGTTGGAGT GTAAACAAAA GATTGCAGAT TATGAGAAAG AAAAGACAGT GGTTATGGGA AAAGCAAAGG ACGATATGCC TATGATGCAG GGCAGACACG GAAGCTACTT GGCTGACTTA GAAGCTTTAT GTTGCCAGAG TGAAGAGAAA TCATTTGAGT TAGCTATGGA GATAAAGAAA AGAAAAGAAC TCTATAGTAC TTGCAAAAAG CTGAAGTCCC AATATAATTT TCTCTGCAAA AGGTTTGGTT TTACTCCTGA CAGTGTTCTT CACCAAAGCA GCCTTGAGGA CTACCTCGAG AAACCAGCAA TCTCGAGTTT TCTTGAAAAG AAACACTCAG AAACTGCTGA AGGAGCAGAC AAAGTGAGAA TTGGTGATGG CTCGAGTGGC AACAACTGCG AGAAAGAGAG GATAATCAAA ACGGTGCAGA CACCTATCAC TTCCATCTCA CCAATTGTGC GATTACCTGG TGTCAGAAGT GACCCCTCTG CTGCAAAATC TCCACAGCTG AGTGGATCAA AGCGTCCAGC TTCCATTTGG AGAGACACAA GGTCTCGCCA ATCTCCTGGA GGCCATGATC CTCATGATGA TTTTCTAGAT ACTCCCATTG AGAATGTCAA AAGGGTCGCT GGGGAAGAAA AACATGTTCA TAATGTTGCT AAGAAAGATG ATTCAGACGA TGAGACACAG GACATGAATC CTAAACCGAG TCCATCAAGG CAGCGAATTC AAGTTGTAGA AACGAGTAAA AAAAGTTTCA AGCATGTGGA GTCAGTGAGG AAAAAAGCTG AGAGGGAGAA TTTGAAAGGG ATAGAGTGTA AGCAGTGCAA GAAATTCTAT GATGCTGTAC ATCCTGAGAA TGAAGGAAAT GGTAACAAAA GCTTGAGATG TGAGCATCAT GAAGGTGTGT CGAGGCATCG TTATAGATAC GCTCCTCCAA TGACTCCTGA AGGATTTTGG AACATCGGGT TTGAATCCGA AATGGGCCTC CTTCACGTGT ATATATTAGA CGCACAACAA TCGTCTTTTC TGATTTACGA TTCAATCCCT CCGATCGTTG GCCTCCTGTT TCCGTTTTGT TCGATATCGT TCCGACGACT TTTCACCGAG CTTATCTGTT CAACAGTGAC TACAATTCAA CTATTGCACT TGGTTTGTTC GGTAATGGAC AACAAAGGAG CACCTCCTAG CATCTTTGTG AATGATGGGT CATTCATGGA AAGATTCAGA CAGCTTCAAC AGGAGAAAGA TAAAGACAAG GACAAGGTTG TCCAAGTTGA GGATTCTAAG CCGGTGAAGA TTATATCAAA TCCCAAACCT TCTGCTAATA AAATTTCCAT TGGATTAAAG ACCAATGATG CCCAGAAGAA AGGTGGTAAG CTTGCTTTCA GCTTGAAGCA AAAGTCTAAG CTTCTTGCAC CTCCTGTGAA GCTTGGTACT GAAGAAGATG AGGATGAGGA GGATGCTAAA AATGATCAAG GTTTTGGATT TGTAAAGCGT CAAAAGTTAG AGCAGAGAGA CACGCCTGTA AAGTCAGCAA GAGTATCTGA TGTTGCACCA CCTCCGCCCA GTGATCCTAC TGTGAAGAAA GTTGCTGATA AACTAGCAAG TTTTGTTGCT AAGCATGGAA GGCCATTTGA GCACATTACA CGGCAAAAGA ATCCTGGGGA TACACCATTT AAATTTCTTT TTGACGAGAA CTGTGCGGAC TACAAGTACT ATGTATTCAA GCTGTCTGAA GAGGAAAAAT CAATTTCACA AACCAATGAT TCTGGTGTAC TTCACAGTGG TGATGCAGGC CCGCGAACGT CCACAGCAGC AATCACTTTG CAAAAGCCAG CTTATCAACA AACAGGATAT CAGATCCCTG CTTCAGCTCT CTATGATGCT CCTGAGGAAC CTGGAGCTTC TTCTAGATCT GCTCAGGCAT CAATTACAAG ACCCAGCAAC AGTGACTCCT TTAGTGGGCC GAGGGGTGCA GACCCTATAT CAATGATGGA GTTTTACATG AAGAAGGCTG CCCAAGAAGA GAAAATGAGA CGTCCGAGGC AGTCAAAAGA TGAAATGCCT CCACCAGCTT CCCTTCAAGG CCCATCTGAA ACTTCGTCCA CAGACCCTGG AAAGAGAGGT CATCACATGG GTGATTATAT CCCACTTGAG GAGCTAGATA AGTTCCTTTC AAAGTGCAAT GATGCAGCTG CACAAAAAGC CACAAAGGAG GCTGCTGAGA AGGCTAAGAT CCAAGCAGAT AATGTTGGAC ATAAACTCTT GTCAAAAATG GGTTGGAAAG AAGACAAGGA GCTTAGAAAA TTGGAGGAGT GGATTACAGG TGAAGGTATA GGAAGCTCCA GAAAGGGTAT GGCAGACCCT ATAATGGCAG GCGATGTAAA GACAAACAAC TTGGGAGTTG GTGCTTCCGC TCCAGGAGAA GTCAAGCCTG AGGATGACAT ATACGAGCAG TACAAGAAGC GGATGATGCT GGGTTACAAA CACAGACCCA ATCCACTGGG AAATCCCAGG AAGGCGTATT ACTAA |
| Length | 3345 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15080692.. 15086176 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G52115.1 |
| Description | gamma response gene 1 |
| TAIR curator summary | Induced in response to ionizing radiation, shows basal expression in mitotically active cells and high expression in endoreduplicating cells. May be involved in DNA damage-induced growth arrest. Protein sequence contains a PEST destruction box. |
| Alias | [ATCOM1][ATGR1][COM1][GR1][gamma response gene 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.65685 |
Ahg488208 | FIZZY-related 3 |
| 6.48074 |
Ahg894331 | Transducin/WD40 repeat-like superfamily protein |
| 9.16515 |
Ahg940499 | leucine-rich repeat transmembrane protein kinase family protein |
| 9.27362 |
Ahg485510 | |
| 10.9545 |
Ahg482617 | Family of unknown function (DUF662) |
| 11.3578 |
Ahg471712 | protein-protein interaction regulator family protein |
| 11.5326 |
Ahg470104 | Acyl-CoA thioesterase family protein |
| 12.2474 |
Ahg921768 | Galactose oxidase/kelch repeat superfamily protein |
| 13.7477 |
Ahg922101 | cleavage and polyadenylation specificity factor 30 |
| 14.1774 |
Ahg494779 | Abscisic acid-responsive (TB2/DP1, HVA22) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|