Detail



ID : Ahg472231

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472231|fgenesh2_kg.1__2185__AT1G20050.1
Sequence
GGATCGAAGA GATTAGTAGT AAGCACATCA TCAGCACTCA GATCTAGTAG AGAGTTCCAC TAATTAACAT TGGGCCATTG ACCAGAAAAC ACAGAGAGAG AGAAAAAAAC CATGGAGGAA TTGGCGCATC CGTACGTTCC GAGAGATCTG AAACTGCCGG GATACGTACC AATCTCCATG TCCATGTCCT CCATTGTCAC TATCTACCTC GGTTCTTCCC TCCTTGTTGT CTTCCTCGTC TGGCTTCTCT TCGGGAGGAA GAAATCTAAA GTTGAGAAAT TGCTTATGTG TTGGTGGGCA TTCACTGGTC TCACTCACAT CATCCTCGAA GGCTATTTCG TTTTCTCTCC TGAGTTTTTC AAGGACAACA CTTCTTGTTA TCTCGCTGAA GTCTGGAAAG AATATAGCAA AGGTGATTCG AGATACGCAG GTAGAGATTC TGCAGTTGTG TCTGTTGAAG GGATCACTGC TGTTATCGTA GGCCCTGCTT GTCTCCTAGC TATATATGCC ATTGCTAAGG AGAAGTCGTA TAGCTACGTG CTTCAGCTTG TGATTTCGGT TGGCCAGCTC TACGGATGTT TGGTTTATTT CATTACTGCT ATCTTGGAAG GAGACAACTT TGCTACAAAC TCTTTCTACT ATTACTCCTA CTACCTCGGG GCTAATGGAT GGTGGGTCTT GATACCTTCA CTCATTTCTT TCCGTTGCTG GAAAAAGATT TGTGCAGCTG CAAACAACAA CGTTGAGATT AAGACGAAGA AGAAAACCCG TTGAAGCAAG GATCAAAGAA TCTTTTATCT CTTCAGGTCA CTGCTATTAT AGCAATGAAC ATTTGTCACC TTTTGCGGAT GATTTATCCA TTTTAAAAAC TTTGACTATG TTGTCTGTCT CTTTATTTGC ACTTTTGTT 
Length909
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8161792.. 8163043
Download Sequence
A.thaliana
AGI-codeAT1G20050.1
DescriptionC-8,7 sterol isomerase
TAIR curator summaryC-8 sterol isomerase
Alias[HYD1][MAD4][HYDRA1][miRNA action deficient 4]
Gene coexpression
MR
MR Locus Description
14.1067 Ahg490357 ARM repeat superfamily protein
24.4131 Ahg942264 Threonyl-tRNA synthetase
24.8193 Ahg939906 clathrin adaptor complexes medium subunit family protein
30.282 Ahg328739 CRS1 / YhbY (CRM) domain-containing protein
48.6826 Ahg936275 2-oxoacid dehydrogenases acyltransferase family protein
49.3559 Ahg478217 Protein of unknown function (DUF740)
53.1507 Ahg920156 Transducin/WD40 repeat-like superfamily protein
56.7803 Ahg475250 ATP-citrate lyase A-2
63.8436 Ahg944415 Pentatricopeptide repeat (PPR) superfamily protein
63.9687 Ahg491070 NAD(P)H dehydrogenase (quinone)s
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression