| Annotation |
|---|
| Description | jgi|Araly1|944415|scaffold_700644.1 |
| Sequence |
GTTTTCTCTC TAAGCCTCTC CAATGGAGGT TACCTCCACC ACCTTCATCT CTACCACCAG ATCTTCTAAG TATCTCACCT TGACTTCTTA CTCTCCGGTG ATTCTTCCGG CTTCTACTCT CCGCCGTGAT TTTCTCGGTT GTTGTCATAG TCTCCGACGT CCTTCTCCTC ATCTTCGTAC TCGCGCCGGG AAACGCAATT CTCGTCGCTC TTCAATTCGA TCGCCTCGTT TAGTTGTTAG AGCTTCTCTC GATTCTGGTT TGATTCTTGT TATTGTGGCT GTCACTGCCT TTTCCGCCAT TGCTTTCGCT TACTGCCAAA ATACTTTCAG GAAGCGGAAA ACTTCCGATG TGGTTGCAGC ATCTACTGGA ACGATTCGTG GCGGAAAAAT CAGTACTGAG AATCGGCGGG AAAGTAAACA TTTAGATGGA GATGTTCATG AAGGCAATCC TGTGGAAATA AATGGAGGTT TCAGAAAGAT GGAGGAACAA AGTGTGAAGC TTTTGGAGGA AGAGGAGACT CATCAAATCC AGGAAATTGC TGTGATGGAG TATGATTCAT TTTCAGCTGA GGAGTCTCAG TTTGCTGTTG CCAGTGTCAG CACAGTTACC AAGGAACATA CTTTAATAGA TGAATCCCTT TCATCTTCTA TTGTTAATGG GTCTGTTGCT TTGGAATCAG CTACCTTTAG AGTTAAAACA CAAGTTGAAA ATAGCGAAGA TCAGAAGGGT TTGGAGCATG ATTTTTCTCA GGCAGTGGTG GGAATTCATT CGATTGCTTC TCCACAGGTG GTAGATGATA CACGTGCTCT AGAGTATGAG TACAATGGTT TGCTCCAGAA GCCTCTCGAA TACAGCGTCT TTGCGGAGAG TAAGAGAGAA GAGATTCACA CTTTTTATGG GTCTAAGCAT TCATCAGCCA AGTCTTCAAG GTTACCAAGT CTAAAAGCAG TCTCTCCTAG TGTTACTTCT GCAACTAATA GTTTATTGCT GGACCACAAG AACAATGGAG TAATTGATAC TCAGTTCCCA GGACATAGTT CTGGTCAGGC TACTGCTGAT GTTCAAGAAG AAAAACTTGT GGCAAACGGT AACGGCGGTG TATCCCACAT TAGGAAAGAC GTTAAAGGAG ACTGGAAATT TCCAAATGAT GGGACGCATG TGGGTCACCA AACTGATGAA AGCATGCCTC AGTTCCCTGC TCGAAACTTT GAGCTACATA ATAGTAATGG ACGTTCTCCA GAAAGTAATG ATGCTTACAA CCGTTTACTT AGAGATGGAA GGATAAAGGA TTGCATTAGC TTGCTCGAAG ATTTGGACCA AAGGGATCTA TTGGACATGG ACAAGATTTA TCATGCGAGT TTCTTTAAAG CCTGCAAGAA GCAAAGGGCT GTCAAGGAAG CATTTCGCTT TACCAAGTTG ATTCTAAATC CAACCATGAG CACATTCAAT ATGTTAATGT CTGTCTGCGC AAGCTCCCAG GACATAGAAG GAGCTCGGGG AGTTTTGCGT CTGGTACAAG AGAGTGGTAT GACTGCTGAT TGCAAACTTT ACACAACTTT AATATCGAGT TGTGCTAAAA GTGGAAAAGT TGATGCAATG TTCGAGGTGT TCCACCAGAT GTCAAATTCT GGAGTGGAAG CCAATCTTCA CACATTCGGT GCACTTATTG ATGGCTGTGC TAGAGCTGGA CAAGTAGCTA AGGCATTTGG TGCTTATGGA ATTTTAAGGT CTAAGAATGT TAAGCCAGAC CGGGTTGTAT TCAACGCCCT CATCTCTGCA TGTGGTCAAT CAGGAGCTGT CGACCGTGCT TTTGATGTGT TAGCTGAAAT GAAGGCTGAG ACGCACCCTA TAGACCCTGA TCATATCACG ATCGGTGCAT TGATGAAAGC ATGCTGTAAT GCTGGTCAGG TAGAACGAGC AAAAGAAGTT TACCAGATGA TCCATAAATA TGGAATCAGG GGTACTCCAG AAGTGTATAC CATTGCTGTG AATAGTTGCA GCAAGTCTGG GGACTGGGAT TTTGCATGTA GCATATACAA GGACATGAAA GAAAAAGACG TGACCCCTGA CGAGGTGTTT TTCAGTGCAT TGATTGATGT TGCAGGACAT GCAAAAATGT TAGACGAGGC TTTTGGCATT CTTCAGGATG CAAAATCTCA AGGGATACGT CTTGGAACTG TATCATATAG CTCACTGATG GGAGCTTGTT GTAACGCGAA GGATTGGAAG AAAGCACTGG AGCTCTATGA AAAAATCAAG TTAATCAAAC TTAGACCAAC AATTTCAACA ATGAATGCCC TTATAACTGC TTTGTGTGAA GGTAATCAAC TGCCCAAGGC TATGGAATAT CTCGATGAGA TAAAGACTTT AGGGTTAAAA CCAAATACTA TTACTTACTC AATGCTCATG CTGGCAAGTG AAAGAAAGGA TGACTTTGAG GTAAGTTTCA AGCTTCTTTC TCAAGCAAAA GAAGATGGAA TATCACCAAA CTTCATCATG TGCAGATGCA TAACCAGCCT GTGTAAGCGA AGGTTTGAGA AAGCTTGCGC TGGTGGTGAA CCTGTTGTGT CCTTCAAATC AGGGCGACCT CAAATTGAAA ATAAATGGAC ATCAATGGCC TTGATGGTTT ACCGTGAGAC AATTTCAGGT GGAACGGTTC CTACTACAGA AGTAGTTTCA CAAGTTTTGG GGTGCTTGCA ACTTCCACAT GATGCTGCTT TGCGGGATAG GCTGATATCG ACTTTAGGCA TAAACATTTC TTCACAAAAA CAACATAACA TATTCCCACT AGTCGATGGA TTTGGAGAGT ATGATCCTCG TGCATTTTCA CTACTTGAGG AGGCTACTTC TCTTGGAGTT CTTCCTTCTG TGTCCTTTAA TAAAATTCCA CTATTTTTTG ACACAACAGA ATTGCCGAAA AACGTAGCTG AGGTTTACCT CTTAACCATC TTTAAAGGTC TTAAGCATCG CCTTGCAGCT GGTGCGAAGA TACCTCACAT TAATTTGATC ATTTCCATGG AAGAGAAGGA AATTAGGAGT TCTGAAGGAG AGAAGACAAT TGACCTTACA GGAAGGGTCG GACAGGAAAT TGGTGCATTG TTGAGAAGGT TAGATATACC ATATCATAGA AAGGATTCAA GATTAAGAAT CAATGGTGTT TCTTTGAAGA ACTGGTTTCA ACCAAAGCTG GATTCGCCTT TCTCTGGTGG GAAACCAGGG GATTTAAGAT CATCGCAAGT ACCATTAGGA AACCAAATCA GTCGTCAGCA ACGCAGCATT CGACTAGGGA ACCTGTCACT TGAGTGAGAA ACTGAGAAGG CGTCTCT |
| Length | 3327 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2444201.. 2450132 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G34830.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA. |
| Alias | [MRL1][PDE346][MATURATION OF RBCL 1][PIGMENT DEFECTIVE 346] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg495389 | FTSH protease 11 |
| 5.09902 |
Ahg495320 | Class II aaRS and biotin synthetases superfamily protein |
| 9.32738 |
Ahg471925 | Translation initiation factor 2, small GTP-binding protein |
| 10.4403 |
Ahg495040 | methionine S-methyltransferase |
| 10.4881 |
Ahg477305 | DEAD/DEAH box helicase, putative |
| 13.4164 |
Ahg929719 | CRS1 / YhbY (CRM) domain-containing protein |
| 14.8324 |
Ahg483095 | Protein of unknown function (DUF399 and DUF3411) |
| 15.1658 |
Ahg495645 | Mitochondrial transcription termination factor family protein |
| 15.4272 |
Ahg482168 | glutamate receptor 5 |
| 15.8745 |
Ahg943720 | Major facilitator superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|