| Annotation |
|---|
| Description | jgi|Araly1|472328|fgenesh2_kg.1__2282__AT1G20920.2 |
| Sequence |
CAAACCTTTT CCACAATTTC CAGAAGTTTA GGGTTCCGAC GTTCTTGTTC ACTCTAGATT CTTCGCTTAG CTTCGTCTTC TCCATCGAAG ATTTATCTCT GTAAGCTTCA AAACCTTGTT TGTTTTCTGT TCGATTAATC TGAGATTATC TCCTCACACA TTGATTCTGA ATCAGGCAAT TCGCGGTGGA TCGCCGCGGC GGGCGAATTT TCATTGATTT TTCATTGAAT CTGCGTTTAG GAATGGAGGT AGAGAAATCC AAATATAGGA GCGAAGATTT GGACGTTGTG GAGGAGGAGA GTCGGCGAGA TCGTGATCGG ACGTAAAGAG AAGGAGAGGG AGCGGAGACG GAGGGATAAG GATAGGGTGA AGAGACGGTC TGAGCGAAGG AAGAGTAGTG ATTCTGAGGA TGATGATGAA GAAGAGGATG AGAGGGATAA ACGCAGAGTT AAGGAGAAGG AGAGAGGGCA TCGAGAACAT GAGAGAGATA GAGGGAAAGA CCGGAAAAGG GATAGAGATA GAGAGAGGGA TGAGAGGAAG GAGAAAGAAA GAGAAAGGGA GAAGGATAGA GAGAGGAGAG AACGGGAACG GGAAGAGCGG GAGAAGGAGA GAGTTAAAGA AAGAGAAAGG CGGGAACGGG AAGATGGAGA GAGGGATAGG AGAGAACGTG AGAAAGAAAG GGGTAGTAGG AGGAACCGGG AAAGGGAAAG GTCACGAGAG GTTGGCAATG AAGAGAGTGA TGATGATGTC AAGCGTGACT GAAACNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNGCGTGAA AAGAGTGTTG GCAGATCTAG CAGGCATGAA GATAGTCCAA GGAGAAAGAG TGTTGAGGAG GATGGTGAAA AGAAAGAGAA GAAAACCCGA GAAGAAGAAC TTGAGGATGA GCAGAAGAAG TTGGATGAGG AGGTGGAAAA ACGAAGGAGA AGAGTCCAGG AGTGGCAAGA ATTGAAGAGG AAGAAGGAGG AAGCTGAAAG TGAAAGTAAG GGTGATGCGG ATGGTAAAGA GCCCAAGGCC GGTAAGGCTT GGACTCTTGA AGGAGAATCT GATGATGAAG AAGTTCATCC TGAGGAAAAA TCAGAAGCAG AAATGGATGT TGATGAAGAG ACTAAACCTG AAAATGATGG AGATGCCAAG ATGGTAGACT TGGAGAATGA GACAGCTGCT ACTGTCTCTG AGAGTGGAGG TGATGGAGCT GCAGATGAAG AGGAAATTGA TCCTTTAGAT GCTTTTATGA ATACTATGGT ATTACCTGAG GTTGAGAAGC TTAGCAATGG TGCTCCTCCC CCAGCAGTCA ACGATGGTAT TTTGGATTCT AAAATGAATG GGAAGGAAAG TGATGACCAG CCAAAGAAAG GTTTTAATAA GGCCCTTGGT AGGATAATTC AAGGTGAAGA TTCTGATTCA GATTATTCAG AACCAAAGAA TGATGATGAT CCAAGTTTAG ACGAAGATGA TGAGGAGTTC ATGAAGAGAG TGAAGAAGAC AAAAGCTGAG AAGTTGTCCC TTGTTGACCA CTCAAAAATA GAGTATGAAC CTTTCCGGAA GAACTTCTAT ATCGAAGTGA AGGATATCTC TAGGATGACA CAAGAAGAAG TTAACACTTA CAGAAAGGAA TTGGAGCTGA AAGTTCATGG AAAGGATGTT CCAAGACCCA TAAAGTTTTG GCACCAGACT GGGCTAACCA GCAAAATTTT GGATACTATG AAGAAGCTTA ATTATGAAAA GCCAATGCCT ATTCAAACAC AAGCACTCCC AATCATCATG AGCGGTCGAG ACTGCATTGG GGTTGCAAAA ACTGGTTCAG GTAAAACCCT TGGTTTTGTT TTGCCAATGC TGAGGCATAT CAAAGATCAG CCTCCCGTTG AAGCTGGTGA TGGGCCAATT GGGCTTGTAA TGGCACCTAC GAGGGAGCTT GTTCAGCAGA TTCACAGCGA TATCAGAAAG TTTTCTAAGC CATTGGGTAT AAGATGCGTC CCTGTGTATG GAGGATCAGG AGTTGCCCAG CAAATTAGTG AACTTAAACG AGGTACTGAG ATTGTTGTGT GCACTCCTGG CAGAATGATT GATATCCTTT GCACAAGCAG TGGGAAAATC ACTAATCTGC GAAGAGTCAC ATTTTTGGTA ATGGATGAAG CTGATCGTAT GTTTGACATG GGTTTTGAGC CTCAAATTAC TCGTATTATT CAGAACATTC GACCGGAACG TCAAACTGTG CTTTTTTCTG CCACTTTTCC ACGCCAAGTT GAAACTTTGG CACGTAAAGT CTTGAACAAG CCTGTAGAAA TACAGGTCGG TGGAAGGAGT GTTGTGAATA AGGATATAAC TCAGTTAGTT GAAGTCAGAC CGGAGAGTGA TAGGTTCTTT AGACTTCTGG AACTTCTTGG GGAATGGTAT GAGAAAGGGA AAATTCTGGT TTTTGTTCAG TCGCAGGAAA AATGTGATGC CTTGTATAGG GATATGATTA AATCTAGTTA CCCTTGTCTG TCTCTTCACG GGGGTAAGGA TCAGACTGAT CGTGAATCAA CTATCTCTGA TTTTAAGAGC AATGTCTGCA ATTTGTTGAT TGCCACAAGT GTTGCGGCTA GGGGTCTAGA TGTGAAAGAG CTTGAGTTAG TTGTAAACTT TGATGCGCCG AACCACTATG AAGATTATGT GCATCGCGTT GGCAGGACAG GCAGGGCAGG GCGTAAAGGC TGTGCTGTGA CATTTATCTC CGAGGATGAT GCAAAATATG CACCAGATTT AGTCAAGGCC CTGGAACTTT CTGAGCAGCC AGTTCCTGAT GATCTGAAAG CACTTGCTGA TGGTTTCATG GCGAAAGTGA AACAGGGTAT TGAGCAAGCT CATGGAACTG GCTATGGTGG TAGTGGCTTT AAATTCAACG AAGAGGAGGA AGAAGTTAGA AAAGCAGCAA AGAAAGCACA AGCAAAGGAG TATGGCTTTG AGGAAGACAA GTCTGACTCA GAAGATGAGA ATGATGTAGT AAGAAAGGCA GGTGGTGGTG AGATCTCACA GCAGCAGGCT ACTTTTGCTC AGATAGCTGC CATTGCTGCT GCTGCCAAAG CTGCTGCCGC TCCAGTGAGT GCTCCTGTGA CAGCTAACCA ACTGCTGCCA AATGGTGGCG GGCTTGCCGC CATGCCAGGT GTCCTTCCGG TTACTGTTCC TACCCTTCCT AGTGAAGGGG CAGGCCGTGC TGCAGCCATG GTTGCTGTCA TGAATCTGCA ACACAACCTG GCAAAGATTC AAGCGGATGC AATGCCTGAG CACTATGAAG CAGAACTTGA AATCAATGAT TTCCCACAAA ATGCTCGTTG GAAGGTCACC CACAAAGAAA CTTTGGGTCC AATATCAGAG TGGACTGGAG CCGCTATTAC CACCAGGGGT CAGTTTTATC CTACAGGACG TATACCGGGA CCTGGGGAAC GGAAGCTGTA CTTATTCATT GAAGGACCTA GCGAAAAATC AGTTAAGCAA GCAAAAGTTG AACTCAAGCG TGTTCTTGAA GACATTACAA ATCAGGCCAT GTCCTCACTT CCTGGAGGAG CAACCGGCAG ATACTCAGTC CTTTAATGAA AGCAACCATG AGGTGTGTGA TTATAAGGGA TTCAAATCAC TGAGAGTTTT ATTAAACAAG TATTATTGGT TGATGTTTTG GAATACAATC TCTGCACAAT TGCTAAATCT TTTTACAGAC TTGAACTTGA TGTGATTAGA GAGATGGTCT CATAATGCTT GTTGTTTCTC ATTCCGCAAC TCTTTTCCTC TTTTTAATTT TATTCTCTTT TTCTTTGTTA TGTTTATACA ATGTCCTCGA TGGGTTTGCT AATGAGCATT ACCGCGTGGT GGCTGTAAAA TGATGGGTAA AATCTAGTTT GATGCAGGTT TTGTGTTTGG CAGTATGCTT GTTAGTTTCT TGCATCAATT CCCCGTTTTA CAGCTTTTGG CATCTTTTCT GCAGGGGAAA TCTGTGAAAC ATGAAGCTCT CGGAGAAATG ATATGTAATT TGTTTGTGAT AGACAAGGCA AAGCTGTTTT TACCTCTCCA ATGGGTAAGG GTAAGACTTG GAGCTTATTC AGTTTTTGTG TCTGGATACT TTGTCTGTGG AGCTCCGGAG GGGAAAGTTT ACATCTACTG GGGGAGTTGA TAGGCTTTCG GCCGACTTAA ACGCTGAAGG ACGCTTTCCA AGTAACGGTA AAAGGTGATG TTGCAGTCAG TATGTAGTAA ACATCGGATT GATGATCATA ATAGTACTCA AGTATTGTTT TGCGGATCAA AATTTAAAAA CTAATGGTTC CGAAACAGTG AAA |
| Length | 4343 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8557084.. 8561785 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G20920.1 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| TAIR curator summary | |
| Alias | [RCF1][regulator of CBF gene expression 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg495653 | DEK domain-containing chromatin associated protein |
| 10.4881 |
Ahg486235 | Cysteine proteinases superfamily protein |
| 12.2474 |
Ahg483215 | dehydration-induced protein (ERD15) |
| 14.5945 |
Ahg476192 | cyclin-related |
| 18.4391 |
Ahg932721 | |
| 24.5967 |
Ahg930999 | Ribosomal protein S12/S23 family protein |
| 25.5734 |
Ahg492324 | Fe superoxide dismutase 1 |
| 26.2298 |
Ahg937235 | tetraspanin3 |
| 26.8328 |
Ahg929332 | metallothionein 3 |
| 28.2489 |
Ahg491999 | beta glucosidase 10 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|