| Annotation |
|---|
| Description | jgi|Araly1|483215|fgenesh2_kg.4__2275__AT2G41430.2 |
| Sequence |
AGCTTCGTCA CCGAACCTTA CTTTATATAT TAGTCCTTCT TCTTCTCATC TTCTGGCAAC GTAGGTTCTG GTGATTGATC CTAATCCGTT TTGCTTGTTA AAAAGAAGAA GACATATTTT TATCAAACAA CTTGAGCAAG TAGAAGCAGA TATTTTCCTC AGCCAAGATC TAGAGATTTG AGAATGGCGA TGGTATCAGG AAGACGATCT ACTCTAAACC CCGACGCACC TCTCTTTGTT CCGGCAGCTG TACGACAAGT GGAAGATTTC TCACCGGAGT GGTGGCAATT GGTCACAACT TCGACTTGGT ACCATGACTA CTGGATCAGC CAGCATCAAG GTCCAGATGG TTTCTATGAC AATGGAGAGA ATGAAAATGG TGGAGGCCAG GTTGATGTAG CTGATCTTCT TCCAGAATCA TTTGATTTTG ATGACATGGA AGATTTCTTT GAAACTGATG CTGCTGAGTT TGATCAAGGA TTTGATGGAC GAATGTATTA CCAAGCACCT TCCGAATTCG GCTTTGGAAA GAATGGTGAG ATGGTTAGGA AATCAACTGG TAACAGGAGT CCGAAATCGA TTGTGGAACC GGCAAAGTAT GCGGAAAAGC CAGCGAAATG GGGAAACCAG AGGGTTGCTG CTCCAAGAAA CATCCACCAG CCTCGCTGAA GAAGATATGT TGTTAACTAG TCAGAAGTCA GAGCAGTTTG GTCCTGTATC TTTAGCCACC ACCACTGTAC CTTTGTAATT TTTAGTATTT GCTTCCACAT AAAAAATCTG TAACTTTGTA CCTTTATGAT GTTCATTCTC AACTTGTTGT TATCTCAAAA ATGTAAAAAC ATAAAAAAAA TGTAAACTTT GAAGAGAAAT GAGAACTAGA GTTTATTTCC CACCT |
| Length | 895 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19177724.. 19179057 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G41430.1 |
| Description | dehydration-induced protein (ERD15) |
| TAIR curator summary | Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2. |
| Alias | [CID1][ERD15][LSR1][CTC-Interacting Domain 1][EARLY RESPONSIVE TO DEHYDRATION 15][LIGHT STRESS-REGULATED 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg490677 | Papain family cysteine protease |
| 2.82843 |
Ahg488799 | Aluminium induced protein with YGL and LRDR motifs |
| 3.16228 |
Ahg486891 | Protein of unknown function (DUF567) |
| 4.58258 |
Ahg491400 | gamma vacuolar processing enzyme |
| 4.89898 |
Ahg927009 | Dehydrin family protein |
| 5.09902 |
Ahg473550 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 6.63325 |
Ahg482337 | Dormancy/auxin associated family protein |
| 6.63325 |
Ahg473046 | dormancy-associated protein-like 1 |
| 6.7082 |
Ahg476684 | bifunctional nuclease in basal defense response 1 |
| 6.7082 |
Ahg480439 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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