Detail



ID : Ahg492324

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492324|fgenesh2_kg.7__1757__AT4G25100.2
Sequence
CAACTCGATT ACCAAAAAGC AGAGCCATCC ATAAATCTCA AAACACAGAT TCCACTGGCG TGTGCTCTCC TCACTTGTCC TTGAAACTAG AGCTTCAGTT TAAAAGAATG GCTGCTTCAA GTGCTGTCAC CGCAAACTAC GTCCTCAAGC CACCTCCATT CGCACTGGAT GCTTTGGAGC CGCATATGAG CAAACAAACT CTGGAGTTTC ACTGGGGAAA GCATCACAGA GCTTACGTGG ACAACCTCAA GAAACAGGTT CTTGGAACCG AGCTTGAAGG CAAGCCCTTA GAGCACATTA TCCACAGCAC TTACAACAAT GGTGATCTCC TCCCTGCTTT CAACAACGCT GCTCAGGCGT GGAACCACGA GTTCTTCTGG GAGTCAATGA AACCCGGCGG TGGAGGAAAA CCATCAGGAG AGCTTCTTGC TTTGCTTGAA AGAGATTTCA CTTCTTATGA GAAGTTCTAT GAAGAGTTCA ACGCCGCTGC AGCCACTCAG TTTGGAGCTG GCTGGGCCTG GCTCGCTTAT GCAAATGACA AACTCAAAGT AGTGAAAACT CCAAATGCTG TGAATCCCCT TGTGCTCGGC TCTTTCCCCT TGCTTACCAT TGATGTCTGG GAGCATGCTT ACTACCTTGA CTTCCAGAAC CGGAGACCGG ATTACATAAA GACATTCATG ACCAATCTTG TGTCTTGGGA AGCTGTGAGT GCCAGACTTG AGACCGCAAA GGCTGCTTCT TCCTCTTCTT CTTAAGCAGA GTTCTCAACA ATTTGACTTC AGTGAATAAA GTATTGGTCG TTGTAATAAG GACACAGCTC TCTTGTTCTG TGTCACAGAG TCCTTGATCT AGGTCTTGTG TCATGAACAA TTA 
Length873
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6778197.. 6780344
Download Sequence
A.thaliana
AGI-codeAT4G25100.1
DescriptionFe superoxide dismutase 1
TAIR curator summaryFe-superoxide dismutase
Alias[ATFSD1][FSD1][ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1][Fe superoxide dismutase 1]
Gene coexpression
MR
MR Locus Description
1 Ahg932721
2.82843 Ahg931998 rRNA
3.16228 Ahg489303 YELLOW STRIPE like 2
4 Ahg493510 Rapid alkalinization factor (RALF) family protein
4.24264 Ahg486064 copper chaperone
5.74456 Ahg907518 glutathione S-transferase TAU 16
6 Ahg481882 Tetratricopeptide repeat (TPR)-like superfamily protein
6.32456 Ahg919779 branched-chain amino acid transaminase 2
8.3666 Ahg926057
8.48528 Ahg490488 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression