| Annotation |
|---|
| Description | jgi|Araly1|472410|fgenesh2_kg.1__2364__AT1G21700.1 |
| Sequence |
AAAGAAATTG CGAGAAAAAG GTTTGGTGTT TAGCTCGAGA GCTAGAAATC AGAACGACTC GGAGCAGAGA AGACAAAGAA AGCAATTCTT TTTACTCAGG TTCTTGCTTT GATTCCACAG AACCCAAAAC CTCTCTTTCT CTATCTTCAC CCACAAGAAT GCCAGCTTCT GAAGATAGAA GAGGGAAATG GAAACGGAAG AAGCGAGGGG GATTATCGGC GGCGAGGAAA CCGAAACAAG AGGAGGAAGA TATGGAGGAA GAAGAAGAAG AGAATAACAA CAACAACGAA GAAATGGATG ACGTTGAAAA TGCCGATGAG CTTCACCAAA ACGGCGGCGC AACTCCCGAT CCGGGACTTG GTATTGGCGA GGTAGTTGAA GATTCTGGTT CGCGCATCTC TGATTTCCCG GCAGTGGTTA AGCGCGTTGT GATCCGGCCA CACGCGTCTG TAATGGCTGT TGTGGCGGCT GAGAGAGCTG GTTTGATTGG GGAGACTAGA GGGCAAGGTT TACTTCCAGC TCTGGAGAAC ATTTCGTTTG GGCAATTGCA AGCGTTATCT ACTGTACCGG CTGATTCTCT TGATGGATCG TCTTCGGCTT ATGTTATATC TCCACCACCT ATTATGGAAG GAGAAGGAGT TGTTAAACGC TTTGGGGATC TGGTTCATGT CTTGCCTATG CATTCAGATT GGTTTGCACC AAACACAGTG GATCGACTTG AAAGGCAAGT GGTGCCACAA TTTTTCTCTG GGAAATCGCC AAATCATACA CCCGAAAGTT ATATGGAATT CAGGAACGCC ATTGTTTCAA AATATGTGGA GAACCCTGAA AAGACACTGA CGATTTCTGA TTGCCAAGGA TTGGTAGATG GTATTGACAT CGAAGATTTT GCACGAGTTT TCCGTTTTCT TGATCACTGG GGAATAATCA ATTACTGTGC CACTGCCCAG TCACATCCTG GGCCTTCTAG AGATGTATTG GATGTGAGGG AGGATACAAA TGGTGAGGTC TATGTGCCGT CTGCTGCTTT AACATCTATT GATAGTTTGA TCAAATTTGA CAAGCCCAAC TGTAGACACA AGGGGGGTGA AGTCTATTCA TCCTTGTCAA GTTTGGATGG TGACAGCCCT GACTTGGACA TCAGAATTCG TGAACACCTA TGTGATAATC ATTGCAACCA TTGTTCCCGA CCGCTTCCAA CTGTGTATTT CCAATCGCAA AAGAAGGGTG ATACACTCTT ATGCTGTGAT TGTTTTCAGC ATGGAAGATT TGTTGTTGGA CATTCTTGTC TTGACTTTGT AAGAGTGGAT CCAACCAAAT TTTATGGCGA TCAAGATGGA GACAATTGGA CTGATCAGGA AACTCTCTTG CTTCTTGAAG CTGTGGAACT CTATAATGAA AATTGGGTTC AAATTGCTGA TCATGTTGGT TCCAAGTCAA AAGCTCAATG CAGTCTTCAT TTTCTTCGAT TACCTGTGGA GGATGGTCTT TTAGATAATG TTGAGGTTCC TGGTGTAACG AATACGGAAA ACCCTACAAA TGGATATGAC CACAAAGGAA CAGATTCAAA TGGGGATTTA CCTGGATATT CCGAGCAAGG TTCTGACACT GAGATCAAGC TTCCATTTGT GAAGTCTCCG AATCCGGTTA TGGCATTGGT TGCATTTTTG GCATCAGCTG TTGGACCTCG AGTTGCTGCG TCCTGTGCCC ATGAGTCCCT TGCGGTTTTA TCTGAGGACG ATAGGATGAA ATCCGAGGGA GTGCAAGGGA AAGAAGCCAG CTTGCTTGAA GGAGAAAATC AACAGCAAGA TGGAGCACAC AAAACATCAA GCCAAAACGG AGCAGAACCG CCGACTCCAC TGCCACAGGA TAAGGTTATG GCAGCATTTA GAGCCGGTCT ATCAGCTGCA GCAACAAAAG CAAAATTGTT TGCTGATCAT GAGGAACGCG AAATCCAAAG ACTTTCTGCA AATATCGTTA ATCACCAGCT GAAGAGGATG GAGCTGAAGC TAAAGCAGTT TGCAGAAATT GAAACATTGT TGATGAAAGA ATGCGAACAA GTAGAGAAAA CTCGTCAGAG ATTTTCTGCA GAACGGGCTC GTATGCTCTC CGCAAGATTT GGATCACCTG GAGGAATCTC TCCACAGATT AATAATAATA ATCTCCAAGG CATGTCTCTA TCCACAGGTG GTAATAACAT CAATTCTCTC ATGCATCAGC AACAGCAGCA GCAGCAACAA CAAGCTTCAG CAACTTCTCA ACCAAGCATA ATTCCGGGAT TTAGCAACAA CCCGCAAGTT CATGCACAGA TGCAGTTCAT GGCACGCCAA CAACAACAAC AACAACAACA AGCTTTCTCT TTTGGCCCGA GATTACCTCT TAATGCGATA CAGACCAATG CAGGATCAAC AGCATCACCA AACGTCATGT TTGGCAACAA CCAACTTAAT AACCCTGCAG CAGGAGCAGC ATCGATCAAC CAGCCTTCGT TTAGTCACCC GATGGTTAGG TCTTCCACGG GTTCAGGCTC AGGGTCCGGC TTAGGCTTAA ACTGAGATCC ATCTCTCTAG CTTATTTAGC TTATCAGTAT CCATATTTAT TTTGCCTTGT TATTTTTAAA GATAAGTTAT TGGCTTTGAG ACCGTAGTGT TGTTCTAAGT TAGTGTCTTG TAGTATCAAA TCATCTCTGA ACCATCATCA TTGTGAATT |
| Length | 2709 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8957341.. 8961530 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G21700.1 |
| Description | SWITCH/sucrose nonfermenting 3C |
| TAIR curator summary | a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). |
| Alias | [ATSWI3C][CHB4][SWI3C][SWITCH/sucrose nonfermenting 3C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg314752 | histone mono-ubiquitination 2 |
| 6.9282 |
Ahg935153 | multiprotein bridging factor 1A |
| 6.9282 |
Ahg486820 | TIC-like |
| 8.48528 |
Ahg471133 | |
| 10.3923 |
Ahg924606 | Protein kinase protein with tetratricopeptide repeat domain |
| 10.6771 |
Ahg328471 | Enhancer of polycomb-like transcription factor protein |
| 11.6619 |
Ahg476142 | Sterile alpha motif (SAM) domain-containing protein |
| 14.4914 |
Ahg948606 | chromatin remodeling 4 |
| 14.9666 |
Ahg355577 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
| 19.3391 |
Ahg942061 | RNA recognition motif (RRM)-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|