Detail



ID : Ahg355577

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355577|fgenesh1_pg.C_scaffold_7002750
Sequence
ATGAGAGATG GTACCATGGA CGTCGACGAA TCACCGGTTT CGTGGAAGGT AAAGTCCCTG GAAACATTAG TCGATGGTTC TTTCTCTTCG ACACTCTCGA AACTCTCATC GTCTTCTCGT CTGATTCCGT CGAGTAGAGA TTTTCATTTT TACTACAATT TCGATGAGTT TAAACGCCCA ATCGATGATA TAGCTGGAAG CTCGCAATCA GTTCTCGAGA CGATCGGTGA TTCCGAGCAA GTTTGGGGGA AATCGATGAA GTTTCCTGGC GATGTTGATG AAGTTGATGC TGAGGATTGG CTTTGTAACG TGAATGATGA ATTTATCGAG AGATTTGATG TTTCTGTTGA TGAGTTTCAG AGGATCCGGA AGAAAGAAGA AGAAATTGGT CGGCCTGTGG ATTATAATGG GGATGATGGG TTTCAGATGG TTTATGGGAA GAAGAAAAAG CCTGTCGGTA ATGTGATTAC TGGCTTGGCG GCTAATGGTG GTTCGGTGAT TGATGTTAAG ATGGCTGAGA GGGATAAGAA TTCATCTGGT AAGGCCAAAG TTCCTTTCCA TGTACCAACC ATAAAGAAGC CTCAAGAGGA GTATAACATA CTGGTGAACA ACGCTAATCA ACCGTTTGAG CATGTTTGGT TGGAGAGGAG CGAGGACGAT CAGCGGGTCA TGCATCCACT GGAGAAACTT TCAGTGCTTG ACTTCGTTGA CAAAGATTTA AACGAGATGG AACCTGTTAA GCCCCAACCA CTTGAAGAGA CTCCATTCAA GTTTGTTCAG GAAGTGAAAG ATCTAAAAGA ATTAGTTGCT AAACTGCGTG GTGTTGAAGA GTTTGCGGTT GATCTGGAGC ATAATCAGTA TCGATCTTTT CAAGGATTGA CATGCTTGAT GCAAATTTCC ACCAGAACAG AGGATTATAT AGTTGATACA TTTAAGCTTC GTATTCACAT TGGTCCTTAT CTAAGGGAGA TATTCAAAGA CCCTAAAAAG AAAAAGATAA TGCATGGAGC AGATCGAGAT ATTATCTGGC TTCAACGGGA CTTTGGCATA TATGTCTGCA ATCTCTTTGA CACAGGACAG GCCTCTAGGG TGCTAAATTT GGAGAGAAAT AGCCTGGAGT TTCTTTTGCA GCATTTTTGC GGAGTTACTG CAAATAAAGA ATACCAAAAT GCAGACTGGA GAATTCGACC CCTTCCAGAG GAAATGACAA GATATGCAAG AGAAGATACC CACTATCTTT TATACATATA TGATGTAATG AGACTAGAAC TTGAACGAAT GGCAAAGGAT GACGAGCATA CTGACTCTCC TCTGCTTGAG GTCTACAAGC GGAGTTACGA TGTGTGCACA CAACTATATG AGAAAGAGCT ATTGACCGAG ATTTCATATC TTCACGTATA TGGGCTTCAA GCAGCGGGCT TTAATGCAGC TCAACTTGCC ATTGTTGCGG GGCTTTGCGA ATGGAGGGAT TTCATTGCAC GTGCAGAGGA TGAGAGCACT GGTTATGTAT TGCCAAACAA AGTTCTCCTT GAAATAGCCA AGGAGATGCC TGTTAGTGTT GGCAAATTGC GTCGGATGTT GAAGTCAAAG CATCCTTATA TCGAGCGTAA TGTTGATTCG GTGGTCAGTG TCATCAGGCA ATCAATGCAA AATTCTGCAG CATTTGAGTC TGCCGCTTTA TCTTTAAAAG ATGTGTCTCC TGGAACTGTA ATGGATAAGA ATATTGAACA TATTAGTGAG AAGAAAGATA TGCACGCAGT AGATGTAGCT TCTCCAAGTT TGAAGGAAAA TTCTTCGCAG CTTGAGAGTA CCAGGGACCT AAATATGGAT GCAGCAAATA CTAATGAAGG GAGAGGTTTA GGCACTGGCT TGTTTGGTTC TGCTAAGGTT TCTGCGGCTG TTAGGATTTC TAAGAAACCG AGCAGTGGTT TAGGAGCATT GCTGGGAAGT GCAGCCTCGA AGAAGAAATC TCGAACTGAT GAGAAGGTGA AGGAAGATGT GAAGCTCGAA CAGATAAGAT CATCTGTAAA CCTGTCATTC CATTCGTTTA CAGAGAAAGT TCCTGACTCA AAGTCAACTA CTGGAACAAC TCCGAAGGTT TATGGGAAGC CTGAAGAGAT GTCCACTACT ATGCAAGCCT CTGTTTCCAA GGAAGATGGT GTGACAGAGT TGAAAGATGA TTCAGAAGAA GCCTCAGAGA TTGTTGGTAC TTCTGGTAGA GTTTCAGAGT CCAAAGTATC TGGATCCGAG ACAGGCGATA TTATACTATT AGAAAATGGT GATGAGAAAG AAGTTGAGGC TGAAGATGAA CCAATGTCTC TCTCTGAGTT GTCCACAAAC TTTCAGAAGT GCTTTAAGTC CATGAAAAAG AGCAACAAGG CCCAAAAGCA GACCGATTTT TTAAACATAG AGCCGTTTGA TTATGAAGCT GCAAGGAAAG AGGTGAAATT TGGGGAAGGA CACAAGGGAA GACAAGGAAA GAAAGAAGTT GCAGCAGGTC AGAAGAAGAA GGGGTCTGGA CCGGAGCAGT CAGAGTTTGG TCAAGGAAAA CGGCGTCAAG CTTTTCCGGC ATCTGGGAAC CGAAGTGCGA CCTTTAAAAG TTAG 
Length2604
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17789661.. 17795107
Download Sequence
A.thaliana
AGI-codeAT5G35910.1
DescriptionPolynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg478494 Tetratricopeptide repeat (TPR)-like superfamily protein
4.3589 Ahg483634 Translation elongation factor EFG/EF2 protein
5.19615 Ahg488188 IKI3 family protein
9.48683 Ahg496619 ortholog of human splicing factor SC35
10 Ahg920157 eukaryotic release factor 1-2
10.3923 Ahg943470 cullin 1
14.9666 Ahg472410 SWITCH/sucrose nonfermenting 3C
17.3205 Ahg479648 dentin sialophosphoprotein-related
17.8885 Ahg474419 GTP-binding family protein
19.0788 Ahg486216 nuclear RNA polymerase A1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression