Detail



ID : Ahg472441

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472441|fgenesh2_kg.1__2395__AT1G22070.1
Sequence
TGATGCTTTT GTCGTTTCAT CGTTCGTTTA CTTCAACTTG CTTATTATTC TACGCTCATG GACTAATCAA AGCAACGAAG AAAAAAGCAA ACAACACAAA AAAATATATT AGAAAAAAAA AAAATATCTC TGCTTTTTTC AATGATGGAT ACGCTTCACC TCTAAGTTTT GACCAAAGTT TTCTTCATTT CTCTTCTCTC TTGTGATCAC CGTTTGATCG GAATATTCCT TTAGAATGCC AAGATTCATT CTTCATCTCT CGAGCTTGTG ATGAATTTCT TCTCTGCTTG TCAATGGAGA TGATGAGCTC TTCTTCTTCT ACTACTCAAG TTGTATCATT CAGAGACATG GGGATGTATG AACCATTTCA ACAGTTATCT GGTTGGGAGA ATCCTTTCAA ATCAGATATC AACAATAATC TTAGTAGTAA TCAGAATAAC AATCAGGGTT CTTCAACAAC TCTTGAGGTG GATGCTAGAC CAGAACCAGA TGATAACAAT AGAGAGAATT ATACTTCTGT GTATAATAAT AACTCTGTTG AAGCAGAACC TTCGAGTAAT AATGATCACG ACGAAGAACG GATCAATGAT AAGATGAAAC GGCGTTTGGC TCAGAACAGA GAAGCTGCTC GCAAAAGTCG TTTGAGAAAG AAGGCCCATG TGCAACAGTT AGAAGAAAGT CGGTTAAAGT TGTCACAGCT CGAGCAGGAA CTTGTTAGAG CTAGGCAACA GGGATTATGC GTACGCAATT CTTCAGATAC TAGTTATCTA GGACCAGCTG GGAACATGAA CTCAGGTATT GCTGCATTTG AGATGGAATA CACACACTGG CTAGAAGAGC AAAACAGGAG AGTTAGTGAG ATTCGAACAG CGCTCCAAGC TCATATAGGT GACATTGAGC TCAAAATGCT GGTAGATACT TGCTTGAACC ACTACGCAAA TCTCTTCCGC ATGAAAGCTG ATGCTGCAAA GGCTGATGTG TTCTTCTTGA TGTCGGGAAT GTGGCGAACT TCAACTGAAC GCTTCTTCCA GTGGATTGGA GGTTTCCGCC CATCCGAGCT TTTAAATGTT GTGATGCCAT ACGTTGAGCC CTTAACCGAT CAGCAACTCT TGGCGGTGCG TAACCTCCAA CAATCGTCTC AGCAAGCAGA GGAGGCTCTC TCTCAAGGCT TAGATAAACT TCAGCAGGGT TTGGTCGAAA GCATAGCATT TCAGATAGAA GTTATCGAGT CTGCGAATCA CGGGGTTCAA ATGGCTTCGG CCATGGAGAA TCTTCAAGCA TTGGAGAGTT TTGTGAACCA GGCGGATCAT CTGAGACAGC AGACTCTGCA GCAAATGAGT AAGATATTGA CGACAAGACA GGCTGCTCGA GGCTTGCTCG CTCTAGGAGA ATACTTCCAC AGGCTGCGTG CTCTTAGTTC TCTCTGGGCA GCTCGTCCAC GAGAACACAC TTGATAAGTT AGGAGGCAAA CAAAACAAAG AGAAAGAAGC ACAAGGCAGA TGATGTTACC TATAGGGACT TTCAGAAAGT GTTTGGAGAT GTAAGCTGAT TTTTTCTCTA TTAGAGAGCA TCATCTTCCT CATTGATGTT TTTGTTTACT TAAAAGGAAT AAGAGATGTG TAAATTTGGG TGGAAAACAA TAAAGGTTGA TAAATAAGGC TCTTTTATGT TTGTAAAATA TATAGGGTTT GTTGTCACTC GTCATATATG AGAATCTGAG TCCACCATCA AATTTTTTGT CT 
Length1742
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9233220.. 9235973
Download Sequence
A.thaliana
AGI-codeAT1G22070.1
DescriptionTGA1A-related gene 3
TAIR curator summaryEncodes a transcription factor. Like other TGAla-related factors, TGA3 has a highly conserved bZIP region and exhibits similar DNA-binding properties.
Alias[TGA3][TGA1A-related gene 3]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg488679
8.06226 Ahg490638 rotamase CYP 1
8.48528 Ahg479749 alternative oxidase 1A
12.3693 Ahg946655 Papain family cysteine protease
13.4164 Ahg943129 Copper amine oxidase family protein
14.7309 Ahg481882 Tetratricopeptide repeat (TPR)-like superfamily protein
17.4929 Ahg316070 Calcium-dependent lipid-binding (CaLB domain) family protein
18.5472 Ahg477807 RING/U-box superfamily protein
20.4939 Ahg476957 Chaperone DnaJ-domain superfamily protein
22.3607 Ahg935642 Calcium-binding EF-hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression