Detail



ID : Ahg472704

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472704|fgenesh2_kg.1__2658__AT1G26945.1
Sequence
AACACCTTCT TCTCCACTCT CATTCTCTCT CTGACACATT AACTACTTAT CCTTCTTGCA TTCTTCTCTC TCTCTATAAT ATATCAACTA AGAAGATGTC TAGCAGAAGA TCATCACGTT CAAGACAGTC AGGAAGCTCA AGAATCTCTG ACGATCAGAT TTCCGATCTT GTTTCTAAGC TCCAACACCT CATCCCTGAA CTCCGCCGCC GCCGTTCTGA CAAGGTGTCA GCATCTAAAG TACTACAAGA GACTTGCAAC TACATCAGGA ACTTACACAG AGAGGTTGAT GACCTCAGTG ACCGTTTGTC GGAACTCTTG GCTTCGACGG ATGACAACAG CGCCGAAGCA GCCATCATTA GGAGCTTGCT TAATTATTAA ATCCACATTA CTTAATCTGA GAGCTATTAA TCATCCATTT CCGGCCACCA AATTTATCTT ATTATATATG GGTATCTGTT TACTTCTACA TCATATATTA TGAGATATAG CTAGGGTTTC GGGTCATTGT TAGGCCAACT CATATATTTA TATTTAATAT ATGGTTATGT ATGTATTTAT ATATGCATGT TAATTGTATG TGAGGGTCCA GACCTGGCGT ATAGTAGCCT GTATCATGAG ATCCTCTAAT ATTTATGATT AATGACACAG TTCGTTTCCT TTTTTAC 
Length667
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10459684.. 10461009
Download Sequence
A.thaliana
AGI-codeAT1G26945.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryEncodes a basic helix-loop-helix (bHLH) protein involved in blue/far-red light signaling. Physically interacts with HFR1 and negatively regulates its activity.
Alias[KDR][PRE6][KIDARI][PACLOBUTRAZOL RESISTANCE 6]
Gene coexpression
MR
MR Locus Description
13.7477 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
22.8473 Ahg934869 expansin A8
23.3452 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
26.6458 Ahg496502 Pectin lyase-like superfamily protein
32.0312 Ahg486344 phy rapidly regulated 2
39.7618 Ahg939651 Protein phosphatase 2C family protein
41.7133 Ahg482815 Laccase/Diphenol oxidase family protein
43.0813 Ahg478021 Pectin lyase-like superfamily protein
43.2666 Ahg470654 Fatty acid desaturase family protein
43.9545 Ahg487992 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression