Detail



ID : Ahg478021

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478021|fgenesh2_kg.3__722__AT3G07010.1
Sequence
AAGATAATGG GAATGGTCAC ACAATCTTCT TCTTATATTA ACATCTCTCT CCCGTAGCCT TTTCTTCTAC TCTTCTTCTC CTATTCCTCC TTTTTCTCTT TTTTTTTCTT CGAGAAAAGC CTCTGCCTCA GATAGAGACA GCTAAACAGA ACAGAGCAAG AACACTACAG CCATAACAAT GGCTGTCACA AAACTTATTC TCTTTGCTTC TGCATTGCTT CTAACAACTC TCTTTATCGG CGTTAATTCA TCCAGGTCCA ATGAAACATG GCATGAACAT GCAGTTGAGA ACCCAGACGA AGTAGCTGCC ATGGTGGACA TGAGCATTCG AAACAGCACA GAGCGGCGAA GATTAGGTTA CTTCTCCTGC GCCACCGGCA ATCCAATCGA CGATTGCTGG CGTTGCGACC GCAAATGGCA GCTCCGTCGC AAACGTTTAG CCGATTGCTC AATCGGATTT GGCCGCAACG CAATCGGAGG CCGCGACGGT CGTTTCTACG TCGTAACCGA CCCAGGAGAC GACAATCCGG TTAATCCGAC ACCGGGAACA CTCCGTCACG CCGTGATCCA GGACGAGCCA CTCTGGATCA TCTTCAAACG CGACATGGTC ATAACCTTGA AGCAAGAGCT GATCATGAAC AGCTTCAAAA CCATTGATGG TCGTGGTGTC AATGTTCACA TAGCTAATGG AGCTTGTCTC ACGATTCAGT ACGTTACGAA CATTATTGTC CATGGGATTC ATATTCATGA CTGTGTACCT ACGGGTAATG CTATGGTTAG AAGCTCTCCG TCGCATTATG GGTTTAGATC GATGGCTGAT GGTGACGCCA TCTCGATTTT TGGGTCGAGT CATATTTGGA TTGATCACAA TTCGCTTTCT AATTGTGCTG ATGGGCTTGT TGACGCTGTT ATGAGTTCCA CCGCCATTAC TGTCTCAAAC AATTTCTTCA CCCATCACAA TGAGGTTATG TTGTTGGGGC ACAGTGACTC ATACACAAGA GACAAGGTGA TGCAAGTCAC AATTGCTTAC AACCATTTTG GTGAAGGTTT AATCCAGAGA ATGCCAAGGT GTAGGCATGG ATATTTCCAT GTAGTTAACA ATGACTACAC GCATTGGGAA ATGTATGCAA TTGGTGGTAG TGCTAGTCCC ACCATCAACA GTCAGGGCAA TCGATTTCTT GCCCCAACAA ACCCATTTGC TAAGGAGGTG ACTAAGAGAG AGTACACAGG AGAATCGAAA TGGAAGCACT GGAATTGGAG ATCAGAAGGA GATCTTTTCT TAAACGGAGC ATTTTTCACA CGTTCTGGAG CTGGAGCTGG ATCCAACTAT GCCAGAGCTT CGAGTTTATC AGCCAAATCA TCCTCACTCG TTGGCACCAT GACCTCTTAC TCAGGTGCTC TTAACTGCAG AGCTGGTCGT CGATGTTAAT TGATCAAGAA TCAGGAAGAA AACAAAAAAA AAAAACCTTT TTTTGGTTGT GCAGTAGTCG ACAAGTTTAC CCATATCAGG CCCTCTGTTT TTTTCCTTTT CACTTTTTTT TTTTTTTTTT CACTCTTGGG GTCTCTTGCG ATATATGCTT CCTATTGGAT GTGGAAGCCT AATTTAAACG GCTTCAACTG TAATATAAAG TTGTATGATT AATTCTTTTC ACGTCCATTG ATATAAAGTT GTTTCATGAG TCGTT 
Length1685
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2762331.. 2766102
Download Sequence
A.thaliana
AGI-codeAT3G07010.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.85565 Ahg934869 expansin A8
7.2111 Ahg484442 Protein kinase superfamily protein
8 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
8.66025 Ahg478619 Leucine-rich repeat (LRR) family protein
9.38083 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
9.48683 Ahg473497 GT-2-like 1
10.8167 Ahg490494 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
11.4018 Ahg497370 Mitochondrial transcription termination factor family protein
11.7047 Ahg474754 GDSL-like Lipase/Acylhydrolase superfamily protein
12.8062 Ahg494953 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression