| Annotation |
|---|
| Description | jgi|Araly1|486344|fgenesh2_kg.5__2336__AT3G58850.1 |
| Sequence |
AACACATCCT CTCTCCCTCC GTCAATGGAG AAAACCCTAG CCACTTCCCA TACCAAACGC TCTTCTCCGT CTCCATCCAC CGCCGTGAAC ACAAGCTCCA CCGGTTTCAA CCGCAGAACC AGACAGAGAC TGTCCGATAC AACGGCGAGT GTAAGTGAGA CTGACGTAGA AGATGAAGAC GATGAAGAAG AAGGAGTGGA TGAGAAGATC GAGGCACTTC AGACAATAGT TCCCGGAGGA ACAGCACTTG GTGTCGACGC ACTGTTTGAA GAGACAGCTA GTTACATTTT GGCTCTGCAA TGTCAGATCA ATGCCATTAA AGTTCTTACT GCATTTCTTG AGCGTGGTGA CAAAGAAGAT ATGAAGTTTG GAGGTTGAAG ATTGAACAAA CAATTTGAAT TCTGAAAATC AGAAAAAAAA AGAAAAAAAA AAACAATTTG GAATTCTCTC TGTTTTTTCA TTTATTTTCA CCTTATATTA TTTCTTTTTA TTGTGGCTTA GTTCGGGTTT ATGATTTAGT TATGTGTTTT TATTCCAAAA TATTACGAGA AA |
| Length | 552 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18008861.. 18009445 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G58850.1 |
| Description | phy rapidly regulated 2 |
| TAIR curator summary | Encodes PHYTOCHROME RAPIDLY REGULATED2 (PAR2), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR1 (At2g42870). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510). |
| Alias | [HLH2][PAR2][PHY RAPIDLY REGULATED 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 18.3303 |
Ahg486262 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 18.8149 |
Ahg483330 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 24.3721 |
Ahg332328 | nitrate transporter 2.3 |
| 25.3377 |
Ahg471290 | xyloglucan endotransglucosylase/hydrolase 8 |
| 32.0312 |
Ahg472704 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 32.4962 |
Ahg470382 | HAD superfamily, subfamily IIIB acid phosphatase |
| 49.9199 |
Ahg497154 | FASCICLIN-like arabinogalactan 2 |
| 53.6656 |
Ahg472509 | Gibberellin-regulated family protein |
| 59.1608 |
Ahg487235 | 3-ketoacyl-CoA synthase 19 |
| 64.2262 |
Ahg470654 | Fatty acid desaturase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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