Detail



ID : Ahg931790

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931790|scaffold_304247.1
Sequence
CTTTGAAAGA AAGATCAGCG ATGGCGCAAC CACTCGTGAA GAAAGACGAC GATCACGATG ATGAGCTGGA GTATTCTCCA TTCGTGGGAA TTGAGAAAGG AGCAGTGCTT CAGGAAGCTA GAGTCTTCAA TGATCCTCAG CTTGATCCTA GAAGGTGTTC CCAGGTCATC ACAAAACTTC TTTATTTGCT TAACCAAGGA GAGTCATTCA CAAAGGTTGA AGCAACAGAA GTTTTCTTTT CCGTTACAAA GCTTTTCCAA TCAAAAGATA CTGGTTTGAG GAGAATGGTC TACTTGATCA TAAAGGAATT ATCTCCATCA GCTGACGAGG TTATTATTGT AACAAGCTCC TTGATGAAGG ACATGAATAG TAAGATTGAT ATGTATCGTG CAAATGCTAT CCGTGTCCTG TGCCGAATAA TAGACGGAAC CCTTCTGACA CAAATTGAGC GGTACTTGAA ACAAGCTATT GTGGATAAGA ATCCTGTTGT TTCAAGTGCA GCTTTAGTCA GTGGACTTCA CATGCTAAAG ACAAACCCAG AAATTGTTAA AAGATGGAGC AACGAGGTTC AAGAAGCTGT CCAGTCCAGG GCAGCCCTTG TTCAGTTTCA TGCCTTGGCT TTGCTTCATC AGATACGCCA AAATGACCGC TTGGCTGTCA GCAAGTTGGT TGGTACCTTG ACCAGGGGAG CTGTCCGCTC TCCTCTGGCC CAGTGCCTCT TGATACGTTA CACCAGTCAG ATAATCCGAG ACATGTCCAA CCATGGCCAG TCTGGGGAAC GTCCGTTCTA TGATTTCCTG GAGAGTTGTC TGCGCCATAA GGCAGAAATG GTGATCCTTG AGGCTGCCAG AGCTATAACT GAGCTTGATA ATGTGACCAG TCGAGAATTG ACTCCAGCAA TTACGGTGCT TCAGCTCTTC CTGAGTTCCC CTAAACCGGT GCTGAGATTT GCTGCTGTCC GGACTTTGAA CAAGGTTGCA ATGACTCATC CCATGGCTGT CACCAACTGC AACATTGATA TGGAGAGTTT AATTTCTGAT CAGAATAGAA GTATTGCTAC ACTTGCTATC ACCACACTCC TGAAAACAGG GAATGAATCT AGTGTGGAAC GGTTGATGAA GCAGATAACT AATTTCATGT CAGATATTGC TGATGAGTTC AAAATTGTGG TCGTGGAAGC CATAAGATCA CTGTGTTTGA AATTTCCATT GAAGTATAGA TCACTGATGA ACTTCTTAAG CAACATTCTT AGAGAAGAAG GTGGTTTTGA GTTTAAAAGG GCAATTGTAG ATTCCATTGT AACCATTATC AGAGATATTC CAGATGCAAA GGAAAATGGA TTGCTCCATC TTTGCGAGTT CATCGAAGAT TGTGAATTCA CATATCTTTC AACACAGATA CTTCATTTCC TGGGAATGGA AGGGCCAAAC ACCTCAGATC CTAGCAAGTA TATCCGTTAT ATATATAACC GTGTGCATTT GGAGAATGCA ACTGTTCGAG CTGCTGCTGT TTGCACACTT GCAAAGTTTG GCTTTATGGT TAAAGCGTTG AAGCCCCGGA TTACTGTCTT GTTGAAGCGC TGCATCTATG ACAGTGATGA TGAGGTTCGT GATAGAGCAA CACTCTTTTT GAGTATACTT GGTAATGATG GCCTTGCTGA CACTGAAAAA GATAGCATAG AGTTTCTATT TGGTTCCCTG GAGGCCCCTC TTGTCAACTT GGAGACAAGT CTGAAAAACT ATGAGCCCTC TGAAGAAGCT TTTGATGTTG ACTCTGTGCC TAAGGAAGTC AAATCGCAGC CGCTTGCAGA GAAGAAAGCC AAGGGTAAAA AGCCCACTGG TCTCGGTGCT CCACCACCTG CACCTGTTTC TGGTTTTGAT GCTTATGAAA GAGTTCTATC ATCCATTCCA GAGTTTGCTA CCTTTGGCAA ACTTTTCAAG TCATCTTCAC CTGTGGAGCT AACTGAAGCA GAAACAGAAT ACTCAGTCAA TGTTGTAAAG CATATTTTCG AGAGTCACGT TGTGTTTCAG TATAACTGCA CAAACACAGT ACCAGAGCAA TTGTTGGAGA GGGTCAATGT CATTGTAGAT GCTTCAGAAG CGGAGGAGTT CAGTGAATTA TCTTCTAAAC CACTAAACTC ACTCCCTTAC GATTCCCCTG GTCAGGCCTA TGTGGCGTTT GAGAAGCCAG AAGGAGTACC TGCTGTTGGA AAGTTCTCAA ACACATTGAC TTTCATTGTT AAGGAGGTTG AGCTAAGCAC AGGTGAACCA TTGGATGACG GTGTGGAAGA TGAGTACCAG CTCGAGGACC TTGAGGTTGT CGCTGCTGAC TACATGGTAA ACGTCGGTGT CTCCAATTTC CGTAATGCAT GGGAAAACAT GGACGAGGGA AACGAGCTTG TAGATGAGTA CGGTCTAGGT CCAAGAGACA GCTTAGGGGA AGCTGTAAAA GCTGTAACTG ATCTTCTTGG CATGCAGTCT TGTGAGGGTA CAGAAATGGT TGCGAGCAAC GCAAGGTCAC ACACATGTTT ACTATCAGGT TTGTACATAG GGAACGTGAA AGTGTTGGTG AAGGCACAGT TTGGGATGGA CAGCTCAAAG GAAATTGTAA TGAAACTGGC TGTTAGAGCA GAGGATCCAT CTGTCAGCGA TGCGATTCAC GCACTTGTTG CCAACGGCTA AAGTCAAGTG TTCTTGCTAG ATA 
Length2703
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21791741.. 21796829
Download Sequence
A.thaliana
AGI-codeAT4G34450.1
Descriptioncoatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg939324 heme binding
3 Ahg487031 RNA-binding (RRM/RBD/RNP motifs) family protein
3.87298 Ahg472806 decapping 5
3.87298 Ahg494737 Zinc finger C-x8-C-x5-C-x3-H type family protein
6.9282 Ahg319762 Translation elongation factor EF1B/ribosomal protein S6 family protein
8.7178 Ahg490589 Transmembrane amino acid transporter family protein
9.48683 Ahg470550 Calcium-dependent lipid-binding (CaLB domain) family protein
11.7473 Ahg478196 LMBR1-like membrane protein
13.6015 Ahg492703 DNA-directed RNA polymerase family protein
13.8564 Ahg494672 COP1-interacting protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression