Detail


ID : Ahg473382

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473382|fgenesh2_kg.1__3336__AT1G31930.1
Sequence
CTCAGAGAGA AAAAACAAAT ATCACAGCTA CCAAAACAGA TTCCTCTTAC TTCTTCTTCT TCTCCTCCTC TGAGTTCGTC TTCTCAGATT CAGCTTCGAC TTTTTTGTTG TTTCTTCACT TTTATACAAA AGGTTTCAAT GCTCGCCGGC TATTTGACTT TGATTTTATT GATATGACAA AGCCAATTTG AGGAAATGGT GATGTGATTT GTGTTTTTTT GGGTTTCATC TTGTAAATTG TTATTGGTGG TGGCTCTTTT GATTTTGGAT TTTGTAAAAA CATGGAGAAG AAAGATGAAG GTGAAAGCTG GAAAGAAATG GTGAGAAAGA TGCTTCCTCC TGGAGCTCCT TTACCGGAAG ATCCATCGGA ATTTGATTAC TCCATTGCTT TAGAGTACAC TGGTCCTCCT CCGGTTCATG ATATCCCTAG AGTTTCACCT GTTGATGTTA ATCCTCGTGT GAACAATCCC ATTCCATTAC CGGTCTCTCG TATAGCGGGA GGAGTCACAA GCTCTTCGGG AGGTTCGCCA GCTAGCTCTG AGTCTGTGGT CTCTGTGTTG CATAATAACC CTGAATCATC ATCTGGCTCA GCTTCTGTAT CACCAGTTTC TGGTCATAGG CAAAATGGGA ATCAGATTCG GAGACCGGTT GTGAAATTCA AACCTGTTGA TGATCATGAT AGGATTGAAG GTAGAGAAGC TGCAGAGGAG GAGAACAATG TGGAGGCAGA GACAGAGAGG GAGAGGAAGG TCCATGAGTG TACCGCAAGT ACGAAGAGAA GGAAGAAGAA TAAGAAGAGA GAGTGTTCTA GATGTGGAAA AGCGAAATGG GAAAATAAGG AGACTTGTAT TGTTTGTGAT GAAAAGTATT GTGGAAACTG TGTGCTTAGA GCGATGGGTT CGATGCCTGA AGGAAGAAAG TGTGTGAGTT GTATTGGTCA AGCTATCGAT GAATCGAAAC GGTCTAAATT AGGGAAGCAT TCGCGGGTAT TGTCGCGGTT GCTTAGTCCT TTAGAAGTTA AACAGATCAT GAAGGCGGAA AAAGAATGTA CTGCTAATCA GCTGAGACCT GAGCAGTTGA TTGTGAATGG GTACCCGTTA AAGCCCGAGG AAATGGCTGA GTTGCTCAAC TGTCTTTTAC CACCTCAGAA GTTGAAACCC GGTAGATATT GGTACGACAA AGAATCTGGT CTATGGGGCA AGGAACGAGA GAAACCAGAT AGAGTCATTA GCTCAAACTT GAACTTCACG GGGAAGCTGT CCCCGGACGC AAGCAGTGGA AACACGGAAG TTTATATTAA CGGTCGGGAG ATCACAAAGC TTGAATTAAG GATTTTGAAG CTAGCAAATG TACAGTGTCC ACGTGATACT CATTTTTGGG TATACGACGA TGGGCGTTAT GAGGAAGAAG GGCAGAATAA TATTCGAGGA AACATTTGGG AGAAGGCATC TACGAGGTTC ATGTGTGCGC TGTTTTCTTT ACCTGTTCCT CACGGACAAC CTCGTGGGAT GGTGCAACCA CCGAGTAATT ATGCTACTGT TCCGAATTAT ATAGAGCATA AGAAGATTCA GAAGCTTCTA CTTCTTGGTA TCGAAGGGTC TGGAACTAGC ACTATCTTCA AACAGGCCAA GTTTTTGTAC GGAAACAAGT TTTCAGAGGA AGAGCTTCAA GATATTAAGC TGATGGTACA AAGCAATATG TATAGATATC TCAGTATCCT ACTTGATGGA AGAGAACGAT TTGAAGAGGA AGCTTTATCG CATACGAGAG GTTTAAACGC CGTTGAAGGA GATTCAGGAG GCGAGGAAAT AAATGACGAT GGAACTGTCA CTACACCACA ATGCGTTTAT ACCTTGAACC CGAGGTTGAA GCATTTTTCG GATTGGCTTC TAGATATCAT AGCAACTGGT GATCTCGATG CGTTTTTCCC AGCTGCAACA CGTGAATATG CTCCGTTGGT TGAAGAAGTT TGGAAAGATC CGGCGATACA AGCAACATAT AGACGAAAAG ATGAGCTGCA TTTCCTTCCT GATGTCGCGG ACTACTTCTT GAGCCGGGCC ATGGAAGTAT CAAGCAACGA ATATGAGCCT TCGGAGCGAG ATATTGTGTA TGCAGAAGGT GTTACACAAG GAAATGGATT AGCTTTCATG GAGTTTTCTC TCAGTGAACA CAGTCCAATG TCTGAATCTT ACCCCGAAAA CCCCGACGCC TTATCATCTC CTCAACCAAA GTACCAGCTA ATCCGCGTAA ACGCAAAGGG GATGAACGAT AGCTGCAAAT GGGTAGAAAT GTTTGAAGAT GTACGAGCAG TCATCTTCTG CATCAGCTTA AGCGATTACG ATCAGATCAG CATAACACCC GAAAGCAGCG GAACAGTCCA GTTTCAGAAC AAAATGATCC AAAGCAAAGA ACTTTTCGAA TCAATGGTCA AGCACCCGTG TTTCAAAGAC ACGCCTTTTA TCTTGATCCT AAACAAATAC GACCAGTTCG AGGAAAAGCT AAACCGTGCA CCGTTAACAT CATGCGACTG GTTCAGCGAT TTCTGCCCTG TGAGAACGAA CAACAACGTG CAGTCACTAG CTTACCAAGC TTACTTCTAC GTAGCAATGA AGTTCAAGCT TCTTTACTCG TCTATCACGG GTCAGAAACT GTTTGTGTGG CAAGCTCGGG CTAGGGACCG CGCGAATGTG GATGAAGGGT TTAAGTATGT GAGAGAGGTT TTGAAATGGG ATGAAGAGAA GGAAGAGAGT TACTTGAATG GTGGTGGAGA AGATTCCTTT TATAGTACGG ATATGAGTTC GTCCCCATAT AGACCGGAGG AGTAAAAGAT TGAAACTCTT GATTAATGAT TTTTTGTTAT TTTTAACTTT AAGTAGAGAG ATAATTAATG TGTGAAGAAG AAAAATAAAA TTATTTGTAA T
Length2921
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13773003.. 13777024
Download Sequence
A.thaliana
AGI-codeAT1G31930.1
Descriptionextra-large GTP-binding protein 3
TAIR curator summaryEncodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.
Alias[XLG3][extra-large GTP-binding protein 3]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg478554 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.34847 Ahg483651 GRAS family transcription factor
12.6491 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
15.2971 Ahg481505
16.7332 Ahg938101 Duplicated homeodomain-like superfamily protein
18.6548 Ahg492529 Disease resistance protein (TIR-NBS class)
19.799 Ahg890682 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.0238 Ahg471845 proteasome subunit PAB1
21.9089 Ahg910368 Leucine-rich repeat protein kinase family protein
23 Ahg488871 tubulin alpha-5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression