Detail



ID : Ahg471845

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471845|fgenesh2_kg.1__1799__AT1G16470.2
Sequence
CTCTCTCTCT GCAACTAATC GCTTGTTCGA TCTCGAAGCT GAAGCTAAAG GTAAGCTATT CTTTTCACAG TGTTAGTTCT TTTTCGAAGA TTCGTTTCGA TCTCAAAAAT CCCATTCTAT TAAACTGCTT TTAGACTCTA ATGAAACCTG AATCGTTTGA TCCCGGTAAC GGTGAAACCC TAAATTCTTT TCAGGAAATT GATCTTACTC GTTGTGTTTG TTCACAGCTT TCGCCGATTT GATTAAGGAG CTATGGGAGA TAGTCAGTAC TCGTTTTCTC TCACCACTTT CAGCCCATCT GGGAAGCTGG TTCAGATAGA ACATGCTCTT ACAGCTGTTG GATCTGGCCA AACATCTTTG GGGATTAAAG CTTCTAATGG AGTTGTCATT GCAACTGAAA AGAAATTGCC TTCTATTCTG GTTGATGAAG CATCTGTTCA AAAAATTCAG CATTTGACTC CTAATATTGG AGTTGTATAC AGTGGCATGG GTCCTGATTT TCGAGTTCTT GTTAGGAAGA GTAGGAAACA GGCTGAGCAA TATCTCCGAC TGTACAAAGA ACCCATCCCT GTTACCCAAC TTGTAAGGGA AACCGCTACT GTTATGCAAG AGTTTACTCA ATCGGGTGGT GTTAGGCCTT TCGGGGTTTC CCTGCTGGTG GCTGGATATG ACGACAAGGG TCCCCAATTG TATCAGGTGG ATCCATCTGG CTCTTATTTC TCCTGGAAAG CTTCAGCCAT GGGGAAGAAC GTTTCTAATG CAAAAACCTT CCTTGAGAAA AGGTACACAG AAGACATGGA ACTTGACGAT GCCATTCACA CAGCGATACT GACATTGAAA GAAGGCTTTG AGGGAGAGAT CTCAAGCAAA AATATTGAAA TTGGCAAAAT CGGTGCTGAC AAAGTTTTCA GGGTACTAAC ACCAGCGGAG ATCGATGATT ACCTTGCTGA AGTCGAGTAA CTCCTAGCAT AGTCTAGCAA CAAACATGCG TTTAAGACAG GAATTTCGTG GCATTTGCAG AGTCTTAAAG AGTTGTTTTT TTCTGTAAAA CTTGGATCTT TAAATAGTTT GTTGCTGAAC ACAAGCTGAG TGTTTCTTAT GATTCAATAA CTAATGAAAT CTGTTTCTTT TTTTCTTTCA CTCAGTGAAG GTCTCAGAGA AATCTTAGAG TAGTCTG 
Length1177
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6579179.. 6581712
Download Sequence
A.thaliana
AGI-codeAT1G16470.1
Descriptionproteasome subunit PAB1
TAIR curator summaryEncodes 20S proteasome subunit PAB1 (PAB1).
Alias[PAB1][proteasome subunit PAB1]
Gene coexpression
MR
MR Locus Description
3 Ahg936093 signal peptide peptidase
9.74679 Ahg487831 ENTH/VHS family protein
9.8995 Ahg912263 RNA-processing, Lsm domain
10.4403 Ahg929690 TCP-1/cpn60 chaperonin family protein
15.1658 Ahg494045 Saccharopine dehydrogenase
19.5959 Ahg496432 aldehyde dehydrogenase 12A1
21.0238 Ahg473382 extra-large GTP-binding protein 3
21.0713 Ahg496924 succinate dehydrogenase 1-1
25.3772 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
28.5307 Ahg896503 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression