Detail



ID : Ahg910368

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|910368|Al_scaffold_0001_622
Sequence
ATGGTTTTGA CGGAAGAAGA AGGTGAAGTT ATGGCGGCGG CGAAACGGAA ACTTTTGCTG ACGTTCCTCC TGAGGGCTTT GCGAGTGATC AAAGAAAGTT TGAAGGATCC TGTTCATAGA TTGAGAAATT GGAAGCATGG AGACCCGTGC AATTCGAATT GGACTGGTGT TGTCTGCTTC AATTCCACTC TTGATGACGG TTATCTTCAT GTCAGCGAAT TGCAATTGTT CAGTATGAAT CTCTCAGGGA ATTTGTCTCC GGAGCTTGGC CGGTTGACTC GTCTTACTGT CCTGAGTTTC ATGTGGAACA AGATCACCGG TAGTATACCA AAGGAAATTG GGAATATCAA GTCCTTAGAA CTCTTGCTCT TGAATGGAAA TCTATTAACT GGAAACTTAC CTGAGGAGCT TGGGTTTCTT CCAAACTTGG ACAGAATACA GATTGATGAA AACCGTATAT CAGGACCACT TCCCAAATCG TTTGTAAACT TAAACAAGAC GAAGCATTTT CACATGAACA ATAATTCAAT TAGCGGGCAG ATACCACCAG AGATTGGAAG CCTACCATCA ATTGTTCACA TCCTTCTTGA CAACAACAAT TTATCAGGCT ATCTTCCCCC TGAGTTATCA AACATGCCAC ATTTGCTTAT CCTACAATTA GATAACAATC ACTTTGATGG GACTACGATT CCACAATCTT ATGGAAACAT GTCTAAACTT TTGAAGATGA GTCTTAGGAA CTGCAGCTTG CAAGGGCCAG TGCCTGATCT TAGCAGTATA CCGAACCTTG GTTATTTGGA CCTAAGTCAA AATCAGTTAA ATGGATCTAT ACCTACAGGG AAGCTTTCTG ATAATATCAC AACCATCGAT CTATCCAGCA ACAGTCTAAC TGGAACCATT CCAACAAATT TCTCAGGCCT TCCTCGGCTT CAAAAGTTGT CGCTTGCAAA CAATGCTCTG AGTGGTTCCA TTCCCTCTAG AATATGGCAG GAAAGAGAGC TGAATTCAAC CGAGAGTATT ATTGTGGATC TGCGGAACAA TAGGTTTTCA AATATCTCTG GCAGATCCGA TCTCCGCCCA AATGTGACCG TCTGGCTTCA GGGAAATCCG TTATGCTCAG ATGGAAATCT GCTTCGACTG TGTGGACCTA TAACTGAGGA AGACATTAAT CAGGGACAGG GTTCAACCAA TTCTTATACT ACAACTTGTT CGGACTGCCC ACCCCCTTAT GAATTTTCAC CAGAACCTCT TAGACGGTGC TTTTGTGCTG CTCCTCTGCT TGTTGGATAT CGGTTGAAAA GTCCTGGTTT CTCGGATTTT GTTCCTTATA GATCCGAATT TGAGCAATAT ATCACCTCTG GTCTTAGTTT GAATCTGTAT CAGCTGCGCC TTGACTCATT CCAGTGGCAA AAAGGACCTA GACTTCGAAT GTATTTGAAG TTCTTTCCTG TTTTTGGTTC AAATGCCAAC AATTCTTTCA TATTCAATCG TAGCGAGGTT CGACGAATAA GGGGCATGTT CACTGGATGG CATATTCGAG ACGAAGATCT GTTTGGTCCT TATGAGCTTA TGAATTTCAC ATTGTTAGAT GTCTACAGAG ATGTGTTTCC TTCAGCTTCA CCATCTGGTT TAAGTAAGGG TGCAGTTGCG GGAATAGTTC TTGGTTCTGT TGCAGCTGCA GTTACGCTAA CTGCTATCAT TGCCCTTATC ATTATGAGAA AACGTATGAG AGGATACAGT GCGGTTGCTA GAAGAAAGCG ATCTTCCAAA GCTTCTTTGA AAATCGAAGG TGTGAAGAGC TTTACTTATG ATGAGTTGGC TCTGGCTACA GACAATTTTA ATAGTTCCAC TCAAATTGGG CAAGGGGGTT ATGGAAAGGT CTACAAAGGT ACCCTTGGGA GTGGAACGGT TGTGGCAATT AAAAGAGCAC AAGAGGGATC ATTGCAGGGC GAGAAAGAGT TCCTAACTGA AATTGAATTG TTATCGAGAT TGCATCACAG AAACCTTGTT TCGTTGCTTG GATTCTGTGA TGAAGAAGGG GAACAGATGC TGGTTTATGA GTACATGGAA AATGGTACTT TGCGAGACAA CATTTCTGTT AAATTAAAAG AGCCTCTAGA CTTTGCGATG AGACTACGGA TTGCTTTAGG TTCAGCCAAG GGAATCCTGT ATTTACACAC CGAAGCTAAT CCCCCAATAT TCCATCGCGA TATCAAAGCA AGCAACATAT TGTTGGACTC CAGATTCATC GCAAAGGTTG CAGATTTTGG ACTCTCAAGA CTTGCCCCAG TACCTGATAT GGAAGGCATC TCACCTCATC ACGTGTCTAC TGTTGTAAAA GGGACTCCGG GTTACCTTGA CCCGGAATAT TTCTTGACTC ATCAATTGAC GGACAAAAGC GATGTATATA GTCTAGGCGT AGTGTTCTTA GAGCTCTTTA CTGGAATGCA GCCAATCACA CATGGCAAGA ACATTGTTCG AGAGATCAAC ATTGCTTACG AGTCTGGTTC AATATTATCC GCTGTGGATA AGAGAATGAG CTCAGTTCCA GACGAATGCC TTGAAAAGTT TGCAACTTTA GCGCTGCGAT GCTGCAGAGA GGAGACAGAT GCGAGGCCTT CAATGGCGGA AGTTGTAAGA GAACTGGAAA TCATATGGGA ACTGATGCCG GAATCTCATG TAGCCAAAAC AGCGGATCTG TCTGAGACAA TGACTCATCC ATCATCGTCA TCGAATTCTT CAATCATGAA GCATCCTTAT ACATCGATGG ATGTCTCCGG CTCTGACCTT GTCAGTGGAG TTGCTCCCTC CGTTGCACCT AGATAG 
Length2826
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2325163.. 2330702
Download Sequence
A.thaliana
AGI-codeAT1G06840.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg942741 Protein of unknown function (DUF616)
10.2956 Ahg496212 PDI-like 1-4
11.6619 Ahg474065 actin 8
13.2288 Ahg477260 CASC3/Barentsz eIF4AIII binding
17.6635 Ahg483691 WD-40 repeat family protein / beige-related
19.975 Ahg483042 nuclear RNA polymerase D1B
21.7256 Ahg890655 TOPLESS-related 2
21.9089 Ahg473382 extra-large GTP-binding protein 3
22.4499 Ahg494223 RGPR-related
23.2379 Ahg470079 armadillo repeat kinesin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression