Detail



ID : Ahg473390

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473390|fgenesh2_kg.1__3344__AT1G32070.2
Sequence
ATTTCTTCTA CTCTCAACTC TCAACCACAA AACCAAAAAA ATGCTACTAA TTCCAATTTC TTCTTCTTCT TCTTCCTCTT CCTCTATCCT TCCTCCTAAC TCATATTCAT CGAATCATCA CTCTCTGTTT TTCTCCAATC TCACATACCC GATTCCACAT GGAAGCAGAA AGTTGAAGAC TTTGCGACTC AGAGCCAATT TCTGGGAGTC AATTCGATCT GGGTTTGTGA AGAATAATAA TAGTACCCAA CTTGTTGAAC CACCTTCTAT AGTTGAAGAA GAAGAAGAGA CTGAACCATT ATTGCCTGTG GAATTTGCTT TAGTTGAGAG AAATCTTGAA GATGGTTTAA TTGAAGAGAT CATATTTTCT TCTGGTGGTG AGATTGATGT TTATGATCTT CAAGGTCTTT GTGACAAGGT GGGATGGCCA CGGAGACCGT TAGTGAAACT AGCTGCAGCT TTGAAGAATA GTTATATGGT TGCTACTTTG CATTCTGTAA TGAAGTCATC ATCAGATTCA GATTCATCAG AAGGCGGTAA TGGGGAGAAG CAGCAGGAGA AGAAGCTTAT TGGTATGGCA CGTGCAACGT CGGATCATGC CTTTAATGCT ACAATTTGGG ATGTTCTTGT TGATCCTGAA TATCAGGGTC AAGGGCTAGG TAAAGCGCTT GTTGAAAAAC TTGTAAGGGC TCTTCTTCAG AGAGATATTG GTAATATATC TCTATTTGCA GATAGTCAAG TTGTGGATTT CTATCAGAAC TTGGGGTTTG AGGCTGATCC AGAAGGCATC AAAGGCATGT TTTGGTACCC AAAGTAGTTA CTTGGTGATT ACAAGAGAAT GGGATTATTA TTTGTTTGTA TATTTCTGTG CTTTCTTATA T 
Length881
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13828819.. 13830377
Download Sequence
A.thaliana
AGI-codeAT1G32070.2
Descriptionnuclear shuttle interacting
TAIR curator summaryEncodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.
Alias[ATNSI][NSI][nuclear shuttle interacting]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg336321 tobamovirus multiplication 2B
12.6491 Ahg900004
22.9783 Ahg485029 TRF-like 1
33.0454 Ahg494615 myosin 2
45.6946 Ahg328082 LIM domain-containing protein
46.7333 Ahg945520 PPPDE putative thiol peptidase family protein
48.9081 Ahg926152 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
49.6588 Ahg925020 DC1 domain-containing protein
50.01 Ahg337734 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
53.6656 Ahg339115 tRNA arginine adenosine deaminase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression