Detail



ID : Ahg473445

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473445|fgenesh2_kg.1__3399__AT1G32540.3
Sequence
CTTCATGGCA ATGGTGTGAC CCCAAAATTG ATGTAAGTGA GGAATTGGGA GAAGAAGTGA AGAACACAAG ATGTGTCTTC TTCTTCTAGG TCACTAAAAA CATCAACAAA GAGAGAAAGC AAGCCATTAT TAGAGAGAAG AGATTTATCC AAAAAGTTTT TTGCAATTAT TCTTGGAGTT AATAATGCCA GTCCCTCTTG CACCATATCC AACACCTCCG GCACCGGCAC TGGCCCCGTC GTACACTCCT CCTCCGGCTA ATGGAAGTAC AAGTGGGCAG AGCCAGTTAG TGTGTTCAGG TTGCAGAAAC CTTCTGATGT ACCCCGTCGG GGCAACGTCC GTCTGTTGCG CCGTCTGTAA CGCCGTCACC GCCGTTCCTC CGCCTGGAAC GGAGATGGCA CAGTTGGTAT GTGGAGGATG TCATACACTT TTAATGTACA TTCGTGGAGC TACAAGTGTT CAATGTTCTT GTTGTCACAC TGTTAATCTT GCCCTCGAAG CGAACCAGGT AGCGCATGTG AATTGCGGAA ACTGCAAGAT GCTACTAATG TATCAATATG GAGCAAGATC AGTGAAATGT GCCGTTTGTA ACTTTATCAC CACTGTTGGG GGTTCAACGA GCACGACTGA TTTGAAGTTT AACAATTAAA ACAATTGCGT CTACCTATCA ATATATTGAG TTATGAGCAA TATAGAGGAA GCATCAAATC TTTTTTTTTT TTTTCTCTCT CTCTCTCTCT TCGATCAAGA ATCCGGCAGT GAGATGTCAT GAGTTTGAAA CCATCTTCGG AAGTAAATTA AATATGTAAT TTGTCAAAAT CTCTGACTTT GGTCTCTTTG TCCGTTTGTA TAGAGCTATC TCTCTTCTTT GGTTTTTGTT TTGTTGTTAT TTTCTCTTGA GAAAAATTTG ATTCACCAGT TTGTAATTAA GAGTGATTCA GAAATCAAAG CTAGACTTT 
Length959
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14156528.. 14158739
Download Sequence
A.thaliana
AGI-codeAT1G32540.1
Descriptionlsd one like 1
TAIR curator summaryEncodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.
Alias[LOL1][lsd one like 1]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg484264 alpha/beta-Hydrolases superfamily protein
11.4891 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
13.6015 Ahg473497 GT-2-like 1
19.3391 Ahg900847 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
22.5389 Ahg893513
32.311 Ahg895886 Protein kinase superfamily protein
38.8844 Ahg926846 Gibberellin-regulated family protein
39.95 Ahg475658 beta-hexosaminidase 3
41.1582 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
43.3013 Ahg946661
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression