Detail



ID : Ahg473774

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473774|fgenesh2_kg.1__3728__AT1G43690.1
Sequence
ATCGATGCCC AAACCAAATT GGAAAACTTT ATCTCTTATG AGATTAGGAA ATTATCAGAG AAAAGATTCG AATTGAGTTT CTTCATGATT TGGGCAAAGC TAATCTGATC TTGCGGAGAC AACAACAAAA ATTTGTGTTT TTTATTACCA AATCGTAACG GAAGTGTTCA AAGTTACGAT CTTTGGATCC GGGCAAATCT CTATCTTTTC AATGGCGGAT CATCAAGAAG ACGAAGATTT GAAATTGGCT CTACAGATGA GTATGCAATA CAATCCTCCT GAGCCAAAAC GGAGCAAACC CATTGAAGAA GAAACTGGAT CCGGATCTCA ATCTGGTGGT GAATCACCGG AGGCGAAATC TCGGCGGTTG CAGCGAGAGC TTATGGCTGC TGCTGCTGAG AAACGTATGG TTCTGTTTCC TAAGAGTCCT TCTCCTGTGA ACAAAGATAG GGTTTTGCCA ATTAGGGTTG GTGGTGATAA GGATGATGAA GTTGTGAAGA GTGTGGGATC TGATTTGGGG AAGGAGTTAT CGATGGAAGA GTCTGATCAG TTGTTTTCAA TGGTGTTTGG GAATGAGGTT TCGAAAAGTG TACTTGCTCA ATGGACTAAT CAGGGCATAA GGTTTAGCCC TGATCCTGAA ACTACTATAG GATTAGTGCA GCATGAAGGT GGGCCCTGCG GTGTTTTAGC AGCACTACAA GCATTTGTTC TTAAATACCT TCTTTACTTT CCGGGTGACA GAGTAGCTTC CCCAAGTATG GGTGTCTGGA CATTATCTAA AGATCGTCAT GTTGTATCTG ATTCCTTCTC TTCTGTAACC GAAGAAGCAA AAACAAGGGC CCTTGTTAGA AGCATGTGTG AGATTCTATT TATGTGTGGA AACAACAACC GCGCTGTAAT AGCAAGTTTC ACTAATTTTG AGGATTCCAG TACTAATCAG AAAGATGAGG CAATGGCTAG TGGGCTCCCC ATTGAATCTG CTTCAGATTT GCAGAAGATC TTAAGGTTTG AGACATTCAC TACTCAAGCC AGTGCCCTTA ATAAGCTAGA AGGCACAATA ACTGCTTTCC AAAGTCGCAT GGGTGCTTTG CTGTTCCTAA TTTCTGCTTT ACTCTCCCGT GGACTGGATT CCGTTCAAGC CGACAGGGAT GATCCAAACC TCCCCCTAGT CACTGCACCA TTTGGACATG CCTCCCAGGA AATTGTAAAC CTACTGTTGT GTGGAGAAGC GGTTCCTAAT GTGTTTGATG GAAGGATGGA TCTTGGAGGC GGCATGTTTC TTAAAGGCAT ATCTAAGAAT GTGGATGTGG GCTTCCTCAC GTTGCTCGAG TCTCTCAATT TCTGCAAAGT CGGTCAGAAT CTCAAGTGTC CCAAATGGCC AATATGGGTT ATTGGCAGCG AGTCTCATTA CACCGTCCTG TTTGCACTCG ACCCATCCGT CCAAGAAGAA AACGTACTTG AGCTGAGAGA GTCTCAGATA AGAAGAGCTT TCGATGCAAG AGACGAAAGC GGAGGAGGAG GCTTCATCAG CGTGGAGGCC TTTCACCAAG TTGTTCAGGA AACAAACATC AGACTCCCAA CAGAGAAGCT CAACGATATC TGCGCCACGG GTTTCATCGT GTGGAGCGAG TTATGGCAAG TGATCTTGGA GCTAGACCGA AATTTGGGAG GGATAAAGGA TTCAACAGGA ATGATGGGAA AGAAAGTGTT TGATATTTAT CACTTCAACG GGATTGCCAA ATCCGATATA AACGGTGGTG GTCAATCAAT GGCTGTGGAA GGTGGGACGG TTCCTATGCA GAGGCCAAGG CTGACAAAAC TAAACGTAGC TGTTCCTCCA AAATGGACAC CAGAAGAGTA CATGTCATGT GCACTGCCGC CGAGCAGCTC TGAGAAAGAC TCAGAAGTGA ATCAGCCTAA ACCGGTACAG CATGCACCAT TGGTGGATTG TATCAGAACT CGGTGGTCGC GTGCCGCTTG TAGCTGGTCT GGAGATCCTC CAAGTATAGT CTGAAGAATG TTGTATTATG AGAAAGCTTG AGCGTTATTC TGGCTCGTTG GATTCTAAAG CAAAAAAAAC GGGAAACTGC TGATTTGATT TGGCGGTTTA GACGCGCGTC TGAACTTTCT TTGCGTTGTC CGTTTTTTTT CATGTTGTGT ATTGATGTAG AATTTTTGTT ATCTATTATT GAACATTATT GAGACAAATG AATATTTTAA TTGTTGGATA TAATTGCTTT CAATAACATT GATC 
Length2254
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21214169.. 21218812
Download Sequence
A.thaliana
AGI-codeAT1G43690.1
Descriptionubiquitin interaction motif-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg312763 Protein phosphatase 2C family protein
12.3693 Ahg482295 hydroxyproline-rich glycoprotein family protein
13.8564 Ahg471515 aminoalcoholphosphotransferase 1
16.3707 Ahg476259 Vps52 / Sac2 family
21.3307 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
21.4476 Ahg488258 Thioredoxin superfamily protein
23.3024 Ahg477791 Transducin/WD40 repeat-like superfamily protein
29.8329 Ahg478699 Cwf15 / Cwc15 cell cycle control family protein
30.6594 Ahg929394 phosphatidic acid phosphatase-related / PAP2-related
36.6606 Ahg476847 tubby like protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression