Detail



ID : Ahg474050

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474050|fgenesh2_kg.1__4004__AT1G49050.1
Sequence
TCTATCTCCG ATCAAAACCA GCCCAATTCG ATCGGAGAAA TCTAACAATG GAACAAGATC TTCATGAGCA ACAACGACTC CACAGCGTAG TCATAATCAC TCTTCCACCA TCTGATGATC CTTCACAAGG CAAAACAATC TCTGCTTTCA CTCTCACTGA CCACGATTAC CCACTACAAA TCCCACCCGA GGACAACCCA AACCCGAGTT TTCAACCCGA CCCACTTCAC CAAAACCAAC AATCTCGACG CTTGTTCTCG GATCTCTCAA TGGGTTCGCC GAGATTCGTT CTGGGTCTTG TCGGATTCTC TCTTCTCGCG GTTGCTTTCT ACGCCTCTGT TTTTCCTAAC TCTGTTCAAA TGTTTAGGGT TTCTGATGAG AGGAACCGTG ATGACGATAG TTCCCGTGAA ACGACGTCGT TTGTTTTCCC TGTTTATCAC AAATTGAGAG CTCGAGAGTT CCATGAACGG ATCTTAGCGG AAGATTTAGG TTTAGAGAAT GGAAACTTTG TGGAATCAAT GGATTTAGAG TTGGTCAACC CTGTAAAAGT CAACGATGTT TTATCTACAA GTGCTGGTTC TATTGACTCC TCCACTACGA TTTTTCCCGT CGGTGGTAAT GTGTATCCTG ATGGGCTGTA TTATACACGC ATTCTTGTTG GAAAGCCTGA AGATGGACAA TACTATCATC TTGATATTGA TACTGGAAGT GACTTGACTT GGATCCAATG TGATGCGCCT TGTACTAGTT GTGCTAAGGG AGCAAATCAA CTATATAAGC CTAGAAAAGA TAACTTAGTG AGATCTTCAG AGCCCTTTTG TGTAGAAGTC CAAAGGAATC AACTGACAGA ACATTGTGAG AGTTGTCATC AATGTGATTA TGAGATTGAA TATGCTGATC ATAGCTACTC CATGGGAGTT CTCACCAAAG ATAAGTTTCA TCTCAAACTC CATAACGGAT CATTAGCCGA GTCAGATATA GTTTTCGGGT GCGGATATGA TCAGCAAGGA CTACTGTTGA ACACTCTGCT AAAGACAGAC GGGATTCTCG GTCTAAGCAG AGCTAAAATT AGCTTACCTT CTCAACTTGC AAGCCGAGGT ATTATCAGCA ATGTGGTTGG CCATTGCATA GCCTCTGATT TAAACGGTGA AGGATATATC TTCATGGGAA GTGATTTGGT TCCATCACAC GGAATGACAT GGGTTCCTAT GCTTCACCAT CCCCACTTGG AAGTTTATCA GATGCAAGTT ACAAAGATGA GCTATGGGAA TGCTATGCTT AGCTTAGATG GCGAAAACGG AAGAGTAGGG AAAGTCTTAT TTGACACAGG AAGTTCCTAT ACATACTTCC CTAACCAGGC TTACTCTCAA TTGGTCACAT CACTTCAAGA AGTTTCTGAT TTAGAATTAA CACGCGATGA TTCAGACGAA ACACTGCCTA TCTGCTGGCG AGCTAAAACT AACTCCCCAA TTAGTTCCTT GTCGGATGTT AAGAAGTTCT TCAGACCAAT AACTCTGCAA ATAGGGAGCA AATGGTTGAT CATATCGAAA AAACTTTTGA TTCAACCCGA GGATTACTTG ATCATCAGCA ACAAAGGAAA TGTGTGTCTT GGGATATTAG ATGGAAGCAG TGTTCATGAT GGTTCCACCA TTATTCTTGG AGATATATCG ATGCGTGGAC ACTTGATCGT GTACGACAAC GTGAAACAGA GAATCGGATG GATGAAATCA GATTGCGTTC GGCCCAGTGA GTTTGATCAC AATGTACCTT TCTTTCAAGG CTGAAGGATC CATGATTCTT ACATAAGTGT ATAAACCTGA CACATACACG CTTGTATAAT AGTA 
Length1844
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23985061.. 23987719
Download Sequence
A.thaliana
AGI-codeAT1G49050.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.865 Ahg887884 glutamate receptor 2.7
31.0805 Ahg937652 phosphate transporter 3;2
36.8782 Ahg470722 exocyst subunit exo70 family protein B2
40.3733 Ahg331636 Copper transport protein family
44.7325 Ahg495588 GDSL-like Lipase/Acylhydrolase superfamily protein
50.4777 Ahg313260 formin homologue 4
52.915 Ahg897231 vacuolar ATP synthase subunit H family protein
56.9912 Ahg926495 multidrug resistance-associated protein 3
59.925 Ahg943489 Concanavalin A-like lectin protein kinase family protein
60.1664 Ahg943990 RAB GTPase homolog H1C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression