Detail



ID : Ahg926495

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926495|scaffold_202056.1
Sequence
GTGGAGATCA GCCTTGGTTG CAATGATATA TGAAAAGGGT CTGACCCTTT CATGCCAGTC AAAGCAAGGG CGCACAAGTG GTGAGATAAT AAATTTCATG ACTGTGGATG CTGAGAGGAT TGGTACTTTT AGTTGGTACA TGCATGACCC ATGGATGATC TTTTTCCAAG TCGGTCTAGC TCTGTGGATC TTGTATAGAA ATCTTGGACT AGCATCAATA GCGGCTTTGG TTGCTACCGT TTTAGTAATG CTTGTGAATT ATCCATTCGG AAGAATGCAA GAGAGGTTTC AGGAGAAGTT AATGGAAGCT AAGGATAGCA GGATGAAATC AACATCTGAG ATCTTAAGAA ACATGAGGAT TCTCAAGCTT CAGGGATGGG AAATGAAGTT TCTCTCCAAG ATTAAGGATG ATACTCTCCG CACTTGCAAC CTTCAGGATT CTACAAGAGC CGATCTACGG TCTTCCCGAA ACTATCTCAG TGATTGTGCA GACAAAGTCT CTCTTGATAG ACTTGCATCC TATCTTTCTC TGGAAAATTT ACATCCTGAC ATTGTAGAGA GGCTTCCTAA GGGAAGTTCA GACGTGGCGG TAGAAGTGAT CAACAGCACT TTATCTTGGG ATGTCTCATC TGCTAACCCG ACTCTAAAAG ACATAAATTT CAAGGTCTTT CCTGGGATGA AGGTTGCAGT TTGTGGTACT GTTGGCTCTG GGAAATCGAG CTTACTTTCA TCTTTACTAA GAGAAGTACC CAAGATATCT GGAAGTCTTA AGGTTTGTGG GACAAAAGCG TATGTTGCAC AATCTCCTTG GATTCAGAGC GCATGTTCTT TGAGTAAGGA CCTGGAGATA CTTTCATTCG GTGATCAGAC CGTTATTGGA GAACGCGGCA TCAATTTGAG TGGTGGACAA AAGCAAAGAA TACAGATTGC ACGCGCTCTC TACCAAGATG CGGATATCTA TCTGTTCGAT GATCCTTTTA GTGCTGTGGA TGCACACACA GGGTCACATC TCTTTAAGGT ACAATATTCT TACTTAGCCA TTTGTGTGAT TGTGATTTCT CCTTCCGTAA ACAATCATGT ATCAAATATA TTTTCATTGT CATACTTCTT TCAGGAAGCT CTACTGGGGC TTTTATGTTC CAAATCGGTT ATATATGTAA CCCATCAAGT TGAGTTCTTA CATGCTGCTG ATCTTATACT GGTCATGAAA GATGGGAAAA TTAGCCAAGC TGGAAAATAT AATGATATCC TCAACTCTGG AACAGATTTC ATGGAGCTTA TAGGTGCGCA TCAGGAGGCT CTGACAGTAG TTGGTTCGGT TGATGCCAGT TCTGTTTCTG AGAACTCAGC TTTAGACGAA GAAAATGGTG TTGTTAGAGA TGCTATCGGT TTTGATGGGG AACAAGAAAG TCAAGATCTG AAGAACGATA AATTAGATTC TGGGGAGCCC CAAAGACAAC TTGTTCAAGA GGAAGAGAGG GCGAAAGGTA GCGTCGCTTT GGATGTATAC TGGAAATATA TCACACTGGC ATATGGAGGA GGTCCTGTGA AACTTTCCAC GTTAATGATT GTATATGTTT CTTTGGCATT TGGAAGTTCC CTCTGCATTC TTGTTAGAGC CACGCTTCTT GTCACCGCTG GTTACAAGAC TGCTACTGAA CTGTTTCATA AAATGCATCA CTGCATTTTC CGTTCTCCGA TGTCTTTCTT TGATTCAACT CCAATTGGAA GAATCATGAG TAGAGCTTCT ACTGACCAAT CGGCAGTGGA TTTGGTATTA CCGAATCAAT TTGGATCAGT TGCTATCACA GTCATTCAGC TTATTGGAAT CATTGGAGTA ATGTGTCAGG TTTCTTGGCT TGTTTTTCTC ATCTTTATCC CTGTGGTCGC CGCCTCTATA TGGTATCAGC GGTATTACAT AGCTGCTGCA CGAGAACTTT CACGGTTAGT TGGAGTATGC AAAGCCCCTC TGATTCAGCA TTTTTCTGAA ACGATTTCAG GGGCGACAAC TATCAGGGGT TTTAGCCAAG AATCTAGGTT CCGTTCTGAC AACATGAGGC TGAGTGATTG TTACTCTAGG CCCAAATTCT ATAAAGCTGG AGCAATGGAA TGGCTTTGCT TTCGCCTTGA AATGTTATCA TCACTTACAT TTGTCTTTTC ATTGGTTGTC TTGGTCTCCT TACCTACTGG AGTGATTGAT CCAAGTCTAG CGGGATTAGC TGTAACTTAT GGACTCACTT TGAATACCCT GCAAGCTTGG CTGATTTGGA GTTTCAGTAA TCTTGAGAAC AAAATCATAT CAGTAGAGAG GATTCTTCAG TATGCAAGTG TTCCCAATGA ACCACCTCTT GTGATAGAAT CGAACCGACC TGAGCAATCA TGGCCTTCAC GTGGAATAAC ATGCACTTTC AAAAGAGGTT TAAGAACAGA AATTGTTGGA AGGACGGGAA GCGGGAAGTC AACTTTGATA CAAACTCTTT TCCGCATTGT AGAACCTTCA AGTGGAGAAA TCAAGATAGA TGGAGTGAAT ATTTTGACCA TTGGGTTGCA TGACTTGCGT TTAAGACTAA GCATTATACC CCAAGATCCA ACTATGTTTG AAGGAACAGT GAGAAGTAAC TTGGACCCTC TTGAAGAGTA CACAGATGAT CAAATCTGGG AGGCTCTTAA CAAGTGCCAA CTAGGAGATG AGGTGAGAAA AAAGGAAGAA AAGCTAGACT CATCTGTGAG CGAGAATGGA GAGAATTGGA GTATGGGTCA GAGGCAACTG GTGTGTCTCG GGAGAGTTCT TCTTAAGAAA AGCAAAATAT TGGTGCTTGA TGAAGCCACT GCTTCGGTTG ACACTGCAAC TGACAATTTG ATTCAAAAAA CTTTAAGAGA ACACTTCTCA GATTGTACAG TGATAACCAT TGCACACAAG ATATCTTCAG TTATTGACAG CGACATGGTT CTGCTTCTAA GAAATGGTAT CATTGAGGAG TATGATACGC CAATGAGACT ACTGGAGGAT AAGTCTTCAT CTTTTTCTAA GCTTGTGGCT GAGTACACTT CAAGATCTAG TTCCAGTTTC AATTGAACTA AAACACGACT ATTTTC 
Length3096
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G13080.1
Descriptionmultidrug resistance-associated protein 3
TAIR curator summaryencodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.
Alias[ABCC3][ATMRP3][MRP3][MRP3][ATP-binding cassette C3][multidrug resistance-associated protein 3][MULTIDRUG RESISTANCE PROTEIN 3]
Gene coexpression
MR
MR Locus Description
17.2047 Ahg918319 bZIP transcription factor family protein
17.2916 Ahg318458 calmodulin binding;transcription regulators
20.2485 Ahg492857 VACUOLAR SORTING RECEPTOR 7
22.7156 Ahg474796 Protein of unknown function, DUF538
23.7487 Ahg487303 Transcription elongation factor (TFIIS) family protein
24.1661 Ahg470722 exocyst subunit exo70 family protein B2
25.0998 Ahg489168 Zinc finger, C3HC4 type (RING finger) family protein
28.3549 Ahg952033 Cyclase family protein
28.8444 Ahg471506 Protein of unknown function (DUF1262)
30.8221 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression