| Annotation |
|---|
| Description | jgi|Araly1|474168|fgenesh2_kg.1__4122__AT1G50420.1 |
| Sequence |
ACACACACGC TATTACTCAC AAGATAACCA CCAGAGACTT AGATAGATAG ATAAAGATAG AGAGAAAAAA AAAAAGCTTT AAGACATTTT CTTTAAATTC AGATTCTCTG GATCTTTAAA GAAATTCCGA ATCGTGGGTT TGGTTCTTCT GGTTACGAGT CTCTCAAAGT TCTTTTGGTT CTGAGTAAAT CCAAAATCAA GCTTTGGCCT TCAATGGTGG CTATGTTTCA AGAAGATAAT GGAACATCTT CTGTAGCTTC ATCACCACTT CAAGTCTTCT CAACTATGTC ACTCAACAGA CCGACTCTCC TTGCTTCTTC ATCACCGTTT CATTGTCTCA AAGATCTCAA ACCTGAGGAG CGTGGTCTCT ACTTAATCCA CCTCTTGCTA ACTTGCGCCA ACCACGTTGC GTCAGGTAGC CTCCAAAACG CTAACGCAGC GCTCGAGCAG CTCTCTCACC TCGCTGCTCC TGACGGCGAC ACGATGCAGC GTATCGCTGC TTACTTCACC GAAGGGCTCG CTAACAGAAT CCTTAAGTCC TGGCCTGGTC TCTACAAGGC TCTTAACGCA ACTCAGATAA GAACCAACAA TGTCTCTGAG GAGATTCATG TTAGAAGACT CTTCTTTGAG ATGTTCCCGA TACTCAAAGT CTCTTACTTG CTCACTAATC GAGCTATACT TGAGGCTATG GAAGGAGAGA AGATGGTTCA TGTGATTGAT CTCGATGCTT CTGAGCCAGC TCAATGGCTT GCTTTGATTC AAGCTTTTAA CTCTAGGCCT GAAGGTCCAC CTCATTTGAG AATCACTGGT GTTCATCATC AGAAGGAAGT GCTTGAACAA ATGGCTCATA GACTCATTGA GGAAGCAGAG AAGCTCGATA TCCCGTTTCA GTTTAATCCT GTTGTGTGTA GATTAGACTG TTTAAATGTA GAACAGTTGC GGGTTAAAAC AGGAGAGGCC TTAGCCGTTA GCTCGGTTCT TCAATTGCAT ACCTTCTTGG CCTCTGATGA TGATCTCATG AGAAAGAACT GCGCTTTACG GTTTCAGAAC AACCCTAGTG GAGTTGACTT ACAGAGAGTT CTAATGATGA GCCATGGCTC TGCAGCCGAG GCACATGAGA ATGATATGAG CAACAATGGG TATAGCCCGA GTGGCGACTC GGCCTCATCT TTGCCTCTAC CTAGTTCAGG AAGGACTGAT GGCTTCCTCA ATGCAATTTG GGGTTTATCT CCAAAGGTCA TGGTGGTCAC TGAGCAAGAC TCAGACCACA ACGGCTCCAC ACTAATGGAG AGGCTATTAG AATCACTCTA CACCTACGCA GCATTGTTTG ATTGTTTGGA AACAAAAGTT CCAAGAACGT CTCAAGATAG GATCAAAGTG GAGAAGATGC TCTTCGGGGA GGAGATCAAG AATATCATAG CGTGCGAGGG ATTTGAGAGA AGAGAAAGAC ACGAGAAGCT TGAGAAATGG AGCCAGAGGA TCGATTTGGC TGGTTTTGGG AATGTTCCTC TTAGCTACTA TGCGATGTTG CAGGCGAGGA GATTGCTTCA AGGATGCGGT TTTGATGGGT ATAGAATCAA AGAAGAGAGC GGGTGCGCAG TGATTTGCTG GCAAGATCGA CCTCTATACT CGATATCAGC TTGGAGATGC AGGAAGTGAA TGATATGTAC ACTTTGTGTT CTCTTTTGTT TATGAGCAGA GTCCCTTTCT TTTGTAAACA TAGGGACACA ATCTTAGTTG TTTTGTGATT GTGACTTTCT GTCTCTTTAT GCTATTTTGG CAAATGCTTC TACTGCATCT GCATATAAGC CTTTGTGTGT TGGTTCATTT TGGTCTGGTC TGGTGTAATA CCAAACCAAA TCCAAATTGA GCTGAAGATA ACTAATTTTA TGGTCGGTTC |
| Length | 1900 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 25109225.. 25111435 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G50420.1 |
| Description | scarecrow-like 3 |
| TAIR curator summary | Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). |
| Alias | [SCL-3][SCL3][SCARECROW-LIKE 3][scarecrow-like 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg483908 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 4 |
Ahg492967 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
| 9.38083 |
Ahg891152 | aconitase 3 |
| 15.8745 |
Ahg473574 | Regulator of Vps4 activity in the MVB pathway protein |
| 16.1245 |
Ahg481030 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| 20.1246 |
Ahg921072 | Protein of unknown function, DUF617 |
| 20.6398 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 21.0713 |
Ahg482666 | glucan synthase-like 8 |
| 22.7156 |
Ahg924211 | Esterase/lipase/thioesterase family protein |
| 23.7697 |
Ahg940592 | DEAD/DEAH box RNA helicase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|