| Annotation |
|---|
| Description | jgi|Araly1|891152|Al_scaffold_0007_3138 |
| Sequence |
ATGTATTTAG CCAGAGCTGC TTCTTCTTCT TCCTCTCGCT CTCTTCTCTT CTCCTTCCGC TCTTCCTTCC CTTCTTCTTC CTTCAGATCT CCTCCTGTCT CTTCTCATCT TCTTCGCCGC TCTTTCGTCA CCTCTCTCCC TCGCTTGAGC CACTCGAAAC CTTTTCCACT TCGCATCGGT TCTCAGATCA GAGCCGTTTC TCCTGTTTTA GACCGTCTCC AAAGAACTTT CTCTTCCATG GCTTCAGAGC ATCCGTACAA AGGAATCTTC ACCACTCTTC CTAAGCCTGG TGGTGGCGAA TTCGGAAAAT TCTACAGCTT ACCTGCTCTC AATGATCCTC GCATTGATAA GCTTCCTTAC TCTATAAGGA TTCTTCTTGA ATCTGCGATT CGTAACTGTG ATAACTTCCA AGTCACTAAG GAAGATGTTG AGAAGATTAT TGATTGGGAA AATACTGCTC CTAAACTAGT CGAGATTCCT TTCAAACCTG CTCGTGTTCT TCTCCAGGAC TTTACTGGGG TACCAGCTGT TGTTGATCTT GCTTGTATGC GTGATGCTAT GAATAAACTG GGGAGTGATT CCAATAAGAT CAATCCATTG GTTCCGGTGG ATCTTGTAAT TGATCACTCA GTTCAAGTTG ATGTTGCAAG ATCTGAGAAT GCAGTTCAAG CCAACATGGA GCTTGAATTC CAGAGGAATA AGGAGAGGTT CGCTTTCCTT AAATGGGGTT CTACTGCTTT TCAAAACATG CTTGTTGTGC CCCCTGGTTC TGGTATTGTG CATCAGGTTA ACTTGGAATA TCTGGGAAGA GTTGTGTTCA ATACCAAAGG TCTTCTCTAC CCGGACAGTG TGGTTGGAAC TGACTCACAT ACAACTATGA TTGATGGGTT GGGAGTTGCT GGATGGGGGG TTGGAGGCAT TGAAGCTGAG GCGACAATGC TTGGCCAGCC CATGAGTATG GTATTGCCTG GTGTTGTTGG ATTCAATCTG TCGGGAAAAT TACGTAATGG TGTTACTGCT ACTGATTTGG TTTTAACTGT GACCCAAATA CTGAGGAAAC ATGGTGTTGT TGGCAAGTTT GTTGAGTTTT ATGGTGATGG TATGAGTGAA CTGTCCCTGG CTGACAGGGC CACAATTGCC AATATGTCTC CTGAGTATGG TGCAACCATG GGGTTCTTTC CTGTCGATCA TGTTACTCTA CAGTATCTTA AATTGACTGG AAGAAGTGAT GAGACGGTTG CCATGATTGA AGCATATCTT CGGGCAAATA ATATGTTTGT TGACTACAGT GAGCCTCAGC AAGAGCGTGT TTACTCATCT TATCTGGAAT TAAATCTGGA TAGTGTTGAA CCTTGCATTT CCGGACCTAA GAGGCCACAT GATCGTGTTC CTCTAAAAGA AATGAAAGCT GACTGGCACT CATGTTTAGA CAGTAAAGTT GGGTTCAAGG GTTTCGCCAT ACCTAAGGAG GCGCAAGAGA AGGTAGTAAA GTTTTCTTTC AATGGGCAAC CTGCAGAGCT TAAACATGGC AGTGTGGTCA TTGCTGCGAT CACAAGTTGC ACTAATACAT CAAACCCCAG TGTCATGCTT GGTGCTGCTC TTGTTGCCAA AAAGGCCTGT GACCTTGGCC TACAGGTTAA GCCTTGGACA AAAACAAGTC TTGCACCAGG TTCAGGAGTT GTTACAAAAT ACTTACTAAA GAGTGGCCTG CAAAAATATC TGAACCAGCA GGGTTTCAAT ATTGTTGGTT ATGGCTGCAC TACATGCATT GGCAACTCTG GAGAGATCGA TGAATCAGTG GGAGCTGCCA TTACAGAAAA TGACATTGTG GCTGCGGCTG TGCTTTCTGG GAACAGAAAC TTTGAGGGCC GTGTTCATCC ATTAACAAGA GCCAACTACC TTGCATCTCC ACCTTTGGTG GTTGCCTATG CTCTTGCTGG AACGGTTAAC ATTGACTTTG AGACAGAGCC CATTGGCAAG GACAAGAATG GTAAGGATGT CTTCCTCAGG GATATCTGGC CCACCACAGA AGAAATTGCT CAGGTTGTTC AGTCCAGTGT GTTACCTGAC ATGTTCCGAG CTACTTATGA ATCCATCACC AAGGGAAACC CGATGTGGAA TCAGCTGTCT GTTCCTGAAA ATACTCTCTA CTCATGGGAT CCTAAGTCAA CTTACGTACA CGAGCCTCCA TACTTCAAGG ACATGACCAT GGATCCTCCC GGGCCGAGCA GTGTGAAGGA TGCATACTGT TTACTGAACT TAGGCGACAG TATCACCACA GACCACATAT CTCCAGCTGG AAGCATCCAC AAGGACAGTC CCGCTGCAAA GTATCTCCTC GAACGGGGGG TTGACCGCAA AGATTTCAAC TCATATGGAA GTCGACGTGG AAACGATGAA ATTATGGCTA GGGGAACATT TGCAAATATC AGACTTGTTA ATAAGCTGTT GAATGGAGAA GTTGGCCCTA AGACGGTTCA CATTCCTACT GGAGAGAAGC TATCTGTCTT CGATGCAGCC ATGAGATACA AAGCAGCTGG TGAGGCCACC ATTATTCTGG CTGGAGCTGA GTATGGTAGT GGTAGCTCCC GTGATTGGGC TGCCAAGGGA CCCATGTTAC AGGGCGTTAA AGCAGTGATC TCAAAGAGTT TTGAAAGGAT TCACCGGAGT AACTTGGTGG GAATGGGAAT CATCCCACTG TGTTTTAAGT CTGGTGAGGA TGCAGACACC CTTGGATTGA CAGGTAAGGA GCGTTACACC ATCCATCTCC CAACCGATAT CTCGGAGATA AGACCTGGGC AAGATGTTAC TGTCACTACA GACACTGGAA AATCTTTCAC CTGCACAGTC CGCTTTGACA CTGAGGTGGA ACTGGCTTAC TTCAACCACG GAGGCATACT TCCATATGTG ATCAGAAACT TGAGCAAGCA ATGA |
| Length | 2934 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 17435716.. 17440443 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G05710.1 |
| Description | aconitase 3 |
| TAIR curator summary | Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. |
| Alias | [ACO3][aconitase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg477983 | binding |
| 3.16228 |
Ahg491627 | DDB1-CUL4 associated factor 1 |
| 3.31662 |
Ahg475810 | HEAT repeat-containing protein |
| 3.4641 |
Ahg481580 | 20S proteasome alpha subunit G1 |
| 4.89898 |
Ahg337067 | AAA-type ATPase family protein |
| 6.245 |
Ahg923648 | ZIM-LIKE 2 |
| 6.63325 |
Ahg474459 | phosphoenolpyruvate carboxylase 1 |
| 6.78233 |
Ahg486557 | actin-related protein 7 |
| 7.14143 |
Ahg484011 | myb-like HTH transcriptional regulator family protein |
| 7.48331 |
Ahg495573 | DEA(D/H)-box RNA helicase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|