Detail



ID : Ahg474364

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474364|fgenesh2_kg.1__4318__AT1G52400.1
Sequence
TTTCATTCAC AACAATTTCC TCCACCAATA TCTATAGCTA GAGAGAAAAA AAAGAGAGAG AACACTCAAT GATGGTGAGG TTCGAGAAGG TTCCTTTAGT GTTAGGGTTA GCTCTGGTTC TAACTCTGGT CGGAGCACCG ACCAAAGCCG ATGGACCTGT TTGCGGAGCT GGTCTGCCTG GCAAATTTAG CAGATTAAAC TTCCCTAAAG GCTTCATTTG GGGAACGGCA ACAGCAGCAT TTCAGGTTGA AGGAGCTGTT GATGAAGGTT GCAGAGGTCC AAGCATGTGG GATACTTTCA CTAAGCAGTT CCCAAATAGA TGTGAAAATC ATAACGCTGA TGTTGCTGTG GATTTCTACC ATCGTTACAA GGAAGATATC CAGTTGATGA AGGACCTTAA CACTGATGGT TTTAGACTTT CTATTGCGTG GCCCAGAATA TTCCCCCATG GAAGGATGTC TAAGGGAATA AGCAAAGTAG GAGTCCAATT CTACCACGAC CTCATCGATG AGCTTCTCAA AAACAATATA ATACCACTAG TAACAGTCTT TCACTGGGAT ACTCCTCAAG ACTTGGAAGA TGAATATGGT GGCTTCTTAA GTGGTCGCAT CGTGCAAGAT TTTACGGAAT TTGCGAATTT CACTTTCCAT GAATACGGAC ACAAGGTAAA AAATTGGATC ACATTCAATG AGCCATGGGT GTTTAGTCGT GCCGGTTACG ACAACGGAAA GAAAGCTCCG GGACGTTGTT CACCATATAT CCCCGGTTAT GGAGAGCTTT GTCAAGATGG ACGGTCTGGA TACGAAGCTT ATCAAGTCAG TCACAACTTA CTCTTGTCGC ATGCTTACGC CGTTGACGCA TTCAGAAAAT GCAAACAGTG TGCTGGAGGT AAAATTGGAA TTGCACACAG TCCAGCTTGG TTCGAACCAC AAGACCTTGA GCATGTTGGA GGTGCCATTG AACGTGTGCT TGATTTCATC CTGGGATGGC ATTTGGCTCC AACAACTTAT GGAGATTATC CACAATCCAT GAAAGATCGT GTCGGTCATA GATTGCCAAA ATTTACAGAA GCTGAGAAGA AATTGCTGAA GGATTCTACA GATTATGTAG GAATGAATTA TTATACTTCA GTGTTTGCAA AAGAAATTAA CCCTAATCCT AAGAGTCCGA GTTGGACTAG TGATTCTCTT GTTGATTGGG ATAGCAAGAG TGTGGACGGA TACAAAATTG GTAGCAAGCC GTTTAACGGT AAACTCGATG TGTATTCCAA AGGAATGAGA TACCTTTTGA AGTATATTAA GGATAACTAT GGCGACCCAG AAATTATCAT TACCGAGAAT GGTTACGGAG AGGATCTTGG AGAGAAGCAC AATGACGTAG ATTTTGGGAC ACAAGATCAC AACAGGAAAT ATTATCTCCA GAGGCATCTC TTGAGTATGC ACGAAGCCAT TTGCCAAGAC AAAGTGAACG TTACGGGATA TTTCGTGTGG TCGTTGATGG ACAACTTCGA GTGGCAAGAT GGGTACAAGG CGAGATTCGG GCTTTACTAC ATCGATTTCC AGAACAATCT GACCCGTCAC CAAAAAGTTT CGGGCAAATG GTATTCGGAT TTCCTCGAAC CGAAATTTCC AACCTCCAAG CTGAGGGAAG AACTCTAGAT GATCAAGAAT CCTATCGGGA CAAAATAATT GAGTACAAGA GTCTTCAAAA TGTCCTTGAG GATACTATCA GTTTGTGTGT TCTATGGATC GTGTTTATCG TTTTCATCTT TCGGTTCTTC CTATGTTAGA AGGACCTGTG AGTTGTTCGA GTTTAAATCG TATCAATAAA TGTCTTCTTT TT 
Length1842
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26599791.. 26602771
Download Sequence
A.thaliana
AGI-codeAT1G52400.1
Descriptionbeta glucosidase 18
TAIR curator summaryencodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation
Alias[ATBG1][BGL1][BGLU18][A. THALIANA BETA-GLUCOSIDASE 1][BETA-GLUCOSIDASE HOMOLOG 1][beta glucosidase 18]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg479107 Mannose-binding lectin superfamily protein
1.73205 Ahg474366 TSK-associating protein 1
2 Ahg482953 jacalin-related lectin 23
5.2915 Ahg474322 myrosinase-binding protein 2
5.74456 Ahg474531 GDSL-like Lipase/Acylhydrolase superfamily protein
6 Ahg355235 hydroperoxide lyase 1
7.74597 Ahg926704 Kunitz family trypsin and protease inhibitor protein
10 Ahg937417 jacalin-related lectin 23
15.906 Ahg493370 beta-amylase 5
19.2354 Ahg484907 lipoxygenase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression