Detail



ID : Ahg493370

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493370|fgenesh2_kg.7__2803__AT4G15210.1
Sequence
AGACATGTGA GCTTCAACTA CTACTACTTA TTGCTTATAT TTTCCTACAA CACTCAAAAA AAAAAAAACC AGTTCTTTCT TTGTTTGTAT TTAGAAGAAA ATGGCTGCCA ATTACAACGA AAAGCTTCTT CTTAACTATG TTCCCGTTTA CGTTATGCTT CCGCTGGGAG TTGTGAATGT GGAAAACGTA TTTGCGGACC CAGAAACGCT TGAAACGCAG CTCAAGCGTC TCAAAGAAGA AGCTGGCGTC GACGGCGTGA TGGTCGATGT TTGGTGGGGA ATCATAGAAT CCAAAGGTCC CAAACAATAC GATTGGACCG CCTACAAAAC GCTATTCCAG TTAATCGCGC GTTTAGGACT CAAAATCCAA GCAATCATGT CTTTTCACCA ATGTGGCGGG AACGTCGGCG ACATCGTTAC TATCCCGATC CCACAATGGG TGCGCGATGT CGGCGACAAC GATCCCGATA TCTACTACAC TAACCGTAAA GGAACTAGAG ACATCGAGTA TCTCTCCATC GGTGTTGATA ACCTTCCCCT CTTCGCCGGA AGAACCGCGG TTCAGATATA CAGTGATTAC ATGAGTAGCT TCAAAGAAAA CATGACGGAT TTGATAGAAG CCGGCGCGAT TGTTGACATT GAAGTCGGAC TTGGTCCCGC CGGTGAACTT CGTTATCCTT CTTACCCCCA AAGCCAAGGT TGGGTATTTC CCGGCATCGG AGAATTCCAG TGTTATGACA AGTACTTGAA GAAAGATTTC AAGGAAGCGG CGGCGAAAGC AGGGCACCCT GAGTGGGATT TGCCGGAGGA CGCCGGAGAA TACAATGACA AGCCGGAGGA GACTGGATTT TTCAAGAGAA ATGGGACTTA TGTCTCGGAG GAGGGGAAGT TTTTCTTGAC ATGGTACTCG AACAAACTCA TCTTTCATGG AGATCAGATC ATAGGAGAAG CCAACAAGAT CTTTGCTGGA CTTAAAGTTA ACTTGGCTGC CAAGGTTTCG GGGATTCACT GGTTGTACAA CCACCACAGC CACGCGGCGG AGCTGACTGC TGGATATTAT AACCTCTTCA AGAGAGATGG TTACCGTCCT ATCGCTCGGA TGCTCTCAAA ACACTACGGC ATTCTCAACT TCACTTGCCT TGAGATGAAA GATACCGACA ATACCGCTGA AGCCCTAAGT GCTCCCCAAG AACTTGTTCA AGTGGTACTG AGCAAGGCAT GGAAAGAAGG TATAGAAGTT GCGGGTGAGA ATGCATTAGA GACCTATGGA GCCAAAGGTT ACAATCAAAT TCTTCTTAAC GCGAGGCCTA ACGGGGTTAA CCCGAATGGT AAACCGAAGC TTAGAATGTA CGGATTTACT TACCTTCGGT TATCTGATAC GGTCTTTCAA GAAGACAACT TTAAGCTGTT CAAGAAGTTG GTGAGGAAAA TGCATGCTGA TCAAGATAAT TACTGTGGAG ACGCAGCGAA GTACGGGCAT GAGATTGTGC CGCTGAAAAC GCCGAATTCG CAGCTGACGG TGGAGGATAT CGCCGACGCG GCTCAGCCAA GTGGAGCATT TAAGTGGGAC TCTGAAACCG ACATGAAGGT CGACGGTTGA TTATATTTAT ATGATTGATC GTCTAATCAC AAAGAAAGTA AGAGAAGGAA ACGTGAGAAT AAGAAGAGAA TAAATAAAGA GAATAAGAAG AGGTATTTAC AACTTTAAGG GGTTAAAATT TCGTAAATGT TTGGTTGTGT GTTTTGGGTT ACCAGAAGAA ATAAAACGTG TTTGCTATGT ATTTTGTGAA GTGTGTATTT CTGGTTGAAT TATGGCTGTG TAATAAAAAA AAGTTGTTTG TGTAAAAAAA TAAATAAGTG TTGTCAGTAA AATAATGCAT CATTGT 
Length1886
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12378651.. 12381831
Download Sequence
A.thaliana
AGI-codeAT4G15210.1
Descriptionbeta-amylase 5
TAIR curator summarycytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.
Alias[AT-BETA-AMY][ATBETA-AMY][BAM5][BMY1][RAM1][ARABIDOPSIS THALIANA BETA-AMYLASE][beta-amylase 5][REDUCED BETA AMYLASE 1]
Gene coexpression
MR
MR Locus Description
2 Ahg946577 cellulose synthase-like A01
2.64575 Ahg923674 IAA-leucine resistant (ILR)-like gene 5
4.24264 Ahg482953 jacalin-related lectin 23
4.24264 Ahg479107 Mannose-binding lectin superfamily protein
5.19615 Ahg484907 lipoxygenase 2
6.7082 Ahg317230 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
6.9282 Ahg908972 conserved peptide upstream open reading frame 32
6.9282 Ahg920010 glyoxalase I homolog
7.14143 Ahg473472 UDP-Glycosyltransferase superfamily protein
7.2111 Ahg926592 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression