Detail



ID : Ahg474440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474440|fgenesh2_kg.1__4394__AT1G53170.1
Sequence
AAACCATCTC TCAAAATGGC TTTGACTGTT CACAAGAAAG CTCCCCAAAA GGAGCGTTGC TTTACTCTCA ATCTCCTCCT ATAAAAAGAA GCTCTTCTTC TTCTTCTTCT CATTACCACA AAACTCTTTC ACCGATCTTC TCGTTCCTTT CTTCTATGGG TTCGAAACCC GACCCGGTTG CTCCAACGAA CCCGACTCGT CATGAGAGTA ATGCTGCCAA AGAGATTCGT TACAGAGGCG TTAGGAAACG TCCATGGGGA AGATACGCCG CTGAGATCCG AGATCCAGTT AAGAAAACTC GGGTCTGGCT CGGTACGTTC GATACCGCTC AGCAGGCGGC GCGTGCTTAC GACGCAGCAG CGCGTGACTT TCGTGGTTCG AAAGCTAAGA CCAATTTCCC GACGTTTCTT GAACTCAACG GGAAAACGGA CGGTGTTTTC GTTGGTAGTC CTACTCAGAG TAGCACCGTC ATCGACTCTA CCTCTCCCAC GGCGGCAAGG TTTGTAACAC CTCCGCAGCT CGAGCTCAGC TTAGGCGGCG GCGCGTGTCG TCGTAAGATC CCGCTTGTAC GTCCGGTTTA CTACTTTAAC ATGACGGCGT ATCCGAGGAA GATGACGGCG TGTGGTGTCC AGAGCGAGTC TGAAACGTCG TCGGTCGTTG ATTTCGAAGG TGGAGCTGGG AAGATATCTC AGCCGTTAGA TCTGGATCTT AACTTAGCTC CTCCGGCGGA ATAGGCCGTG AGTTTTTTTT CTTTCTTATG TCGTTTCTTT AGAAAAAACA ATAACGTTTT CTTTTTCTGC CTAAGAAAAA AAATATTATC CGTTTTTTAG AAGAAAGTGG AGAAAAGCTA AAATATAATT TTTAGCTGCC ATGGAAAAAA AGTCGTTATG TATATATTAT TATCAAACCC TATAATA 
Length917
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26957425.. 26958372
Download Sequence
A.thaliana
AGI-codeAT1G53170.1
Descriptionethylene response factor 8
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Alias[ATERF-8][ATERF8][ERF8][ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4][ethylene response factor 8]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg948136 nuclear factor Y, subunit B2
21.2132 Ahg496217 Protein of unknown function, DUF584
23.6643 Ahg926720 alpha/beta-Hydrolases superfamily protein
24.4949 Ahg490325 Concanavalin A-like lectin protein kinase family protein
24.5561 Ahg475300 ARM repeat superfamily protein
25.1396 Ahg492480
26.0768 Ahg478868 nine-cis-epoxycarotenoid dioxygenase 3
26.2298 Ahg479964 heat shock transcription factor C1
26.2298 Ahg474819 galactinol synthase 2
26.7208 Ahg941688
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression